RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ZNF280AP59817 542 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-206ENST00000523469 UBXN2BQ14CS0 331 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 KHDC1Q4VXA5 237 aaKnown RBP7.6□□□□□ -1.19
CPNE3-206ENST00000523469 RNF207Q6ZRF8 634 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 EPM2AIP1Q7L775 607 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-206ENST00000523469 IL17DQ8TAD2 202 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 RGMAQ96B86 450 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 C1GALT1C1Q96EU7 318 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 LRGUKQ96M69 825 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 KMT5AQ9NQR1 393 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 CCDC88BA6NC98 1476 aa7.6□□□□□ -1.19
CPNE3-206ENST00000523469 PPRC1Q5VV67 1664 aaKnown RBP7.6□□□□□ -1.19
CPNE3-206ENST00000523469 DRGXA6NNA5 263 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 PLSCR1O15162 318 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 TRIM24O15164 1050 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 RECQL4O94761 1208 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 FTLP02792 175 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 MTHFD1P11586 935 aaKnown RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 MALP21145 153 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 BUD31P41223 144 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 ZNF267Q14586 743 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 NRN1LQ496H8 165 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 PABPC1LQ4VXU2 614 aaKnown RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 B3GNT9Q6UX72 402 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 SYT12Q8IV01 421 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 MAGEB6Q8N7X4 407 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 NLGN4YQ8NFZ3 816 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 SLC35G2Q8TBE7 412 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 SH3RF3Q8TEJ3 882 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 DIS3LQ8TF46 1054 aaKnown RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 DCLRE1CQ96SD1 692 aaKnown RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 VRK1Q99986 396 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 PARPBPQ9NWS1 579 aa7.59□□□□□ -1.19
CPNE3-206ENST00000523469 EIF2B4Q9UI10 523 aaKnown RBP7.59□□□□□ -1.19
CPNE3-206ENST00000523469 GRXCR1A8MXD5 290 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 DIRC3C9JPN6 131 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 KIAA0391O15091 583 aaKnown RBP7.58□□□□□ -1.2
CPNE3-206ENST00000523469 HMGB1P09429 215 aaKnown RBP7.58□□□□□ -1.2
CPNE3-206ENST00000523469 APOBEC3AP31941 199 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-206ENST00000523469 HK3P52790 923 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 NOGQ13253 232 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 TOB2Q14106 344 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-206ENST00000523469 MINDY4Q4G0A6 757 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 RABL3Q5HYI8 236 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 UBE3BQ7Z3V4 1068 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 FMNL3Q8IVF7 1028 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 MYO1HQ8N1T3 1032 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 TSR2Q969E8 191 aaKnown RBP7.58□□□□□ -1.2
CPNE3-206ENST00000523469 ANLNQ9NQW6 1124 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 CEP72Q9P209 647 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 SORCS3Q9UPU3 1222 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 ABCA5Q8WWZ7 1642 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 ADAMTS12P58397 1594 aa7.58□□□□□ -1.2
CPNE3-206ENST00000523469 TCRBV7S2A1N4TA0A589 114 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 LEFTY2O00292 366 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 GRM6O15303 877 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 PRPF3O43395 683 aaKnown RBP7.57□□□□□ -1.2
CPNE3-206ENST00000523469 CD1AP06126 327 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 FTH1P19P0C7X4 201 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 SMARCA1P28370 1054 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 IL12RB1P42701 662 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 MAP2K6P52564 334 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 CHN2P52757 468 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 NHLH2Q02577 135 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 MLC1Q15049 377 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 IL17RDQ8NFM7 739 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 TAAR9Q96RI9 348 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 FBXO34Q9NWN3 711 aa7.57□□□□□ -1.2
CPNE3-206ENST00000523469 PRG4Q92954 1404 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-206ENST00000523469 NUP160Q12769 1436 aa7.56□□□□□ -1.2
CPNE3-206ENST00000523469 LRRC14BA6NHZ5 514 aa7.56□□□□□ -1.2
CPNE3-206ENST00000523469 MED25Q71SY5 747 aa7.56□□□□□ -1.2
CPNE3-206ENST00000523469 FAM167AQ96KS9 214 aa7.56□□□□□ -1.2
CPNE3-206ENST00000523469 FAM193BQ96PV7 902 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-206ENST00000523469 REXO4Q9GZR2 422 aaKnown RBP7.56□□□□□ -1.2
CPNE3-206ENST00000523469 SIDT1Q9NXL6 827 aaKnown RBP7.56□□□□□ -1.2
CPNE3-206ENST00000523469 PCDHA3Q9Y5H8 950 aa7.56□□□□□ -1.2
CPNE3-206ENST00000523469 GOLGA6CA6NDK9 693 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 GOLGA6BA6NDN3 693 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 NT5C1B-RDH14C9J2C7 533 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 H3BML4 177 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 HAUS5O94927 633 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
CPNE3-206ENST00000523469 PARNO95453 639 aaKnown RBP7.55□□□□□ -1.2
CPNE3-206ENST00000523469 ALDH2P05091 517 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 SBK3P0C264 359 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 GOLGA6DP0CG33 693 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 KRTAP10-2P60368 255 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 FAM102AQ5T9C2 384 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-206ENST00000523469 METRNLQ641Q3 311 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 HEATR3Q7Z4Q2 680 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 SPRED1Q7Z699 444 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 DENND1CQ8IV53 801 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 RHOT2Q8IXI1 618 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 FITM2Q8N6M3 262 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 CPT1CQ8TCG5 803 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms