RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SLC30A10Q6XR72 485 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 POMGNT1Q8WZA1 660 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 HIC2Q96JB3 615 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 FAM81BQ96LP2 452 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 DDX50Q9BQ39 737 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 RANBP17Q9H2T7 1088 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 MRPL47Q9HD33 250 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 LRRC4BQ9NT99 713 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 SLAIN2Q9P270 581 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 PCDHA3Q9Y5H8 950 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 ARL4CP56559 192 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 JAM2P57087 298 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 NOP14P78316 857 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 DEUP1Q05D60 604 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 IZUMO2Q6UXV1 221 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 SPATA24Q86W54 205 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 CPA5Q8WXQ8 436 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 CCDC124Q96CT7 223 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 KCNG1Q9UIX4 513 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 CCDC195A0A1B0GUA6 201 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 TJP3O95049 919 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 FOXN2P32314 431 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SSTR3P32745 418 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PPP4CP60510 307 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ZYXQ15942 572 aaKnown RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 NBPF20Q3BBV1 942 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 DAB2IPQ5VWQ8 1189 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ARMC3Q5W041 872 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PRUNE1Q86TP1 453 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SLC47A2Q86VL8 602 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ARHGEF19Q8IW93 802 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PDIK1LQ8N165 341 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 KAT5Q92993 513 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 BTBD10Q9BSF8 475 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 CD209Q9NNX6 404 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SIX2Q9NPC8 291 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 CHKBQ9Y259 395 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MYH7P12883 1935 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 IQANK1A0A1B0GTG1 560 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ABLIM1O14639 778 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 NPTXRO95502 500 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 RPA3P35244 121 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 GCLCP48506 637 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 RAB27AP51159 221 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 IRX4P78413 519 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 POU5F1Q01860 360 aaKnown RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SP4Q02446 784 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 DBN1Q16643 649 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 HIF1AQ16665 826 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 AOC3Q16853 763 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PCNX4Q63HM2 1172 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PADI6Q6TGC4 694 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 CYP4X1Q8N118 509 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ATP11CQ8NB49 1132 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ASAP3Q8TDY4 903 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SLC26A7Q8TE54 656 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 UCMAQ8WVF2 138 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MTBPQ96DY7 904 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SH2D3AQ9BRG2 576 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 DCLK3Q9C098 648 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MANSC1Q9H8J5 431 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MARCOQ9UEW3 520 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 DUOX1Q9NRD9 1551 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 KLHL33A6NCF5 533 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 COPEO14579 308 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SLC26A4O43511 780 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 POLR2MP0CAP2 368 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 GSTT1P30711 240 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ABL2P42684 1182 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 YARSP54577 528 aaKnown RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 BPIFB4P59827 614 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 CCDC15Q0P6D6 951 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MED21Q13503 144 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 KLHL38Q2WGJ6 581 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 RHPN2Q8IUC4 686 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 GALNT15Q8N3T1 639 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 CEP70Q8NHQ1 597 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 ZNF75CPQ92670 426 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 CCDC17Q96LX7 622 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 GORASP1Q9BQQ3 440 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 SYT15Q9BQS2 421 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MAK16Q9BXY0 300 aaKnown RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 WDR11Q9BZH6 1224 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 MTO1Q9Y2Z2 717 aaKnown RBP9.55□□□□□ -0.88
CSMD1-212ENST00000523387 PCDHB4Q9Y5E5 795 aa9.55□□□□□ -0.88
CSMD1-212ENST00000523387 TBX3O15119 743 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 MSH4O15457 936 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 PSMG1O95456 288 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 GZMAP12544 262 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 ALADP13716 330 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 PEX3P56589 373 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 GALNTL6Q49A17 601 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 SLC45A4Q5BKX6 768 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 KRT39Q6A163 491 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 PIP4K2CQ8TBX8 421 aa9.54□□□□□ -0.88
CSMD1-212ENST00000523387 TLR3O15455 904 aaKnown RBP9.54□□□□□ -0.88
CSMD1-212ENST00000523387 GDF11O95390 407 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms