RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 BTG3Q14201 252 aaPredicted RBP26.11■■□□□ 1.77
PVT1-212ENST00000521951 VWA3BQ502W6 1294 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 FAM109BQ6ICB4 259 aaPredicted RBP26.11■■□□□ 1.77
PVT1-212ENST00000521951 CHRDL2Q6WN34 429 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 C15orf39Q6ZRI6 1047 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 SV2AQ7L0J3 742 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 TRAPPC11Q7Z392 1133 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 LRRC43Q8N309 656 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 VPS16Q9H269 839 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 PRO3102Q9H379 93 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 GOLGA2P5Q9HBQ8 144 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 TMEM8AQ9HCN3 771 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 HCSTQ9UBK5 93 aa26.11■■□□□ 1.77
PVT1-212ENST00000521951 TLL1O43897 1013 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 FMO5P49326 533 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 DSC1Q08554 894 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 TUSC3Q13454 348 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 ZACNQ401N2 412 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 TDHQ8IZJ6 230 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 C1orf127Q8N9H9 656 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 FAM193BQ96PV7 902 aaPredicted RBP26.1■■□□□ 1.77
PVT1-212ENST00000521951 NRDE2Q9H7Z3 1164 aa26.1■■□□□ 1.77
PVT1-212ENST00000521951 RABGGTBP53611 331 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 CBWD6Q4V339 395 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 CBWD3Q5JTY5 395 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 CBWD5Q5RIA9 395 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 TDRD10Q5VZ19 366 aaKnown RBP26.09■■□□□ 1.77
PVT1-212ENST00000521951 KRT39Q6A163 491 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 SCARA3Q6AZY7 606 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 COLGALT2Q8IYK4 626 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 NDST4Q9H3R1 872 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 CWH43Q9H720 699 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 CACNG4Q9UBN1 327 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.09■■□□□ 1.77
PVT1-212ENST00000521951 CASTOR2A6NHX0 329 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 MXI1P50539 228 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 FANCCQ00597 558 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 BIRC3Q13489 604 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 CXorf38Q8TB03 319 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 DNAJB4Q9UDY4 337 aa26.09■■□□□ 1.77
PVT1-212ENST00000521951 GBF1Q92538 1859 aa26.08■■□□□ 1.77
PVT1-212ENST00000521951 ITGB3P05106 788 aa26.08■■□□□ 1.77
PVT1-212ENST00000521951 TPM2P07951 284 aa26.08■■□□□ 1.77
PVT1-212ENST00000521951 LRPAP1P30533 357 aa26.08■■□□□ 1.77
PVT1-212ENST00000521951 SP7Q8TDD2 431 aaPredicted RBP26.08■■□□□ 1.77
PVT1-212ENST00000521951 SIX4Q9UIU6 781 aa26.08■■□□□ 1.77
PVT1-212ENST00000521951 ITGA11Q9UKX5 1188 aa26.08■■□□□ 1.77
PVT1-212ENST00000521951 MRPL42Q9Y6G3 142 aaKnown RBP26.08■■□□□ 1.77
PVT1-212ENST00000521951 PES1O00541 588 aaKnown RBP26.07■■□□□ 1.76
PVT1-212ENST00000521951 PHACTR2O75167 634 aa26.07■■□□□ 1.76
PVT1-212ENST00000521951 VNN1O95497 513 aa26.07■■□□□ 1.76
PVT1-212ENST00000521951 SERPINC1P01008 464 aa26.07■■□□□ 1.76
PVT1-212ENST00000521951 CST3P01034 146 aaPredicted RBP26.07■■□□□ 1.76
PVT1-212ENST00000521951 PAAF1Q9BRP4 392 aa26.07■■□□□ 1.76
PVT1-212ENST00000521951 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.06■■□□□ 1.76
PVT1-212ENST00000521951 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.06■■□□□ 1.76
PVT1-212ENST00000521951 ANO9A1A5B4 782 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 LCHNA4D1U4 455 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 PMM2O15305 246 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 N4BP1O75113 896 aaKnown RBP26.06■■□□□ 1.76
PVT1-212ENST00000521951 ZC3H11AO75152 810 aaKnown RBP eCLIP26.06■■□□□ 1.76
PVT1-212ENST00000521951 RPL9P32969 192 aaKnown RBP26.06■■□□□ 1.76
PVT1-212ENST00000521951 CLCNKBP51801 687 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 MYL7Q01449 175 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 C9orf57Q5W0N0 161 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 FIBCD1Q8N539 461 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 RABGGTAQ92696 567 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 UROC1Q96N76 676 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 AGAP1Q9UPQ3 857 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 SCN1AP35498 2009 aa26.06■■□□□ 1.76
PVT1-212ENST00000521951 PPEF2O14830 753 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 P4HA2O15460 535 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 HLA-DRAP01903 254 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 KRT19P08727 400 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 MYOGP15173 224 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 POLR2BP30876 1174 aaKnown RBP26.05■■□□□ 1.76
PVT1-212ENST00000521951 RBP5P82980 135 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 UPP1Q16831 310 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 UVSSAQ2YD98 709 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 TAS1R2Q8TE23 839 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 DDX27Q96GQ7 796 aaKnown RBP26.05■■□□□ 1.76
PVT1-212ENST00000521951 NAP1L5Q96NT1 182 aaPredicted RBP26.05■■□□□ 1.76
PVT1-212ENST00000521951 TMEM175Q9BSA9 504 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 COQ4Q9Y3A0 265 aa26.05■■□□□ 1.76
PVT1-212ENST00000521951 LGALS16A8MUM7 142 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 PODXLO00592 558 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 PIRO00625 290 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 ALDH2P05091 517 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 OR1G1P47890 313 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 SLC11A1P49279 550 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 NCOA4Q13772 614 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 SPOUT1Q5T280 376 aaKnown RBP26.04■■□□□ 1.76
PVT1-212ENST00000521951 FBXL13Q8NEE6 735 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 RTN4Q9NQC3 1192 aaKnown RBP26.04■■□□□ 1.76
PVT1-212ENST00000521951 PCDHA11Q9Y5I1 949 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 KIAA1671Q9BY89 1806 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 A0A1B0GTH6 734 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 NRP1O14786 923 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 GALTP07902 379 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 IGFBP6P24592 240 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms