RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 JADE1Q6IE81 842 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 IRF2BP1Q8IU81 584 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 DHX40Q8IX18 779 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 EFCAB13Q8IY85 973 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 RNF168Q8IYW5 571 aaPredicted RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 LRRC52Q8N7C0 313 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 RNF169Q8NCN4 708 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZSWIM2Q8NEG5 633 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 CXorf38Q8TB03 319 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 KIF12Q96FN5 646 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZNF560Q96MR9 790 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZMAT2Q96NC0 199 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZNF558Q96NG5 402 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TGS1Q96RS0 853 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 COLEC11Q9BWP8 271 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 APOL6Q9BWW8 343 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 OXCT2Q9BYC2 517 aaPredicted RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 LMAN2LQ9H0V9 348 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 GZF1Q9H116 711 aaPredicted RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 NRDE2Q9H7Z3 1164 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TMEM8AQ9HCN3 771 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 PDE11AQ9HCR9 933 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 DPP3Q9NY33 737 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 KLK14Q9P0G3 267 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 LIMA1Q9UHB6 759 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 COLQQ9Y215 455 aaPredicted RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 PCDHB12Q9Y5F1 795 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 VWA8A3KMH1 1905 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 LINC01553A4QN01 128 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 LRRIQ3A6PVS8 624 aaPredicted RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 TRAPPC3O43617 180 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZC3H11AO75152 810 aaKnown RBP eCLIP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 DDHD2O94830 711 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 POMCP01189 267 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 TPM2P07951 284 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 NFICP08651 508 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 BMPR1AP36894 532 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 AARSP49588 968 aaKnown RBP eCLIP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 AFF1P51825 1210 aaKnown RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 TAP1Q03518 808 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 SGSM1Q2NKQ1 1148 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 C1orf220Q5T0J3 134 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 C9orf57Q5W0N0 161 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 PDE12Q6L8Q7 609 aaKnown RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 PDXDC1Q6P996 788 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 KCNT2Q6UVM3 1135 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 SV2AQ7L0J3 742 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 DPH6Q7L8W6 267 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 TRAPPC11Q7Z392 1133 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 DDX53Q86TM3 631 aaKnown RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 SLC39A11Q8N1S5 342 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 TTC39CQ8N584 583 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 COLGALT1Q8NBJ5 622 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 RDH13Q8NBN7 331 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 PLEKHO2Q8TD55 490 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZNF516Q92618 1163 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 CCDC127Q96BQ5 260 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 IGSF21Q96ID5 467 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 CNOT6LQ96LI5 555 aaKnown RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 FAM81BQ96LP2 452 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 HSD3B7Q9H2F3 369 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 SLC28A3Q9HAS3 691 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 CBX8Q9HC52 389 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 GDAP2Q9NXN4 497 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 SPG21Q9NZD8 308 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 LMCD1Q9NZU5 365 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 PLAGL2Q9UPG8 496 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 SSX2IPQ9Y2D8 614 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 FAN1Q9Y2M0 1017 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 R3HCC1Q9Y3T6 440 aaKnown RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
IGHV4-55-201ENST00000520889 MTCL1Q9Y4B5 1905 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TRIOBPQ9H2D6 2365 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TSC2P49815 1807 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 GRXCR1A8MXD5 290 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 GOLGA6L19H0YKK7 550 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 H3BNC9 293 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 M0QZQ0 153 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 PODXLO00592 558 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 NRP1O14786 923 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 SYN3O14994 580 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 AFPP02771 609 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 CA3P07451 260 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 DLATP10515 647 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 TYMPP19971 482 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 POU3F3P20264 500 aaPredicted RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 RFX1P22670 979 aa6.86□□□□□ -1.31
IGHV4-55-201ENST00000520889 DNAJB2P25686 324 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms