RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 R3HDM1Q15032 1099 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 KHDC1Q4VXA5 237 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 PABPC1LQ4VXU2 614 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 ATXN7L2Q5T6C5 722 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 ZNF529Q6P280 563 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 DENND1CQ8IV53 801 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 AMER2Q8N7J2 671 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 TSR2Q969E8 191 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 CDK5RAP3Q96JB5 506 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 C8orf48Q96LL4 319 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 LRGUKQ96M69 825 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 FAM193BQ96PV7 902 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 TAAR9Q96RI9 348 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 CPEB1Q9BZB8 566 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 C11orf54Q9H0W9 315 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 SPON1Q9HCB6 807 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 C1orf112Q9NSG2 853 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 GNL3LQ9NVN8 582 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 GEMIN8Q9NWZ8 242 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 POGKQ9P215 609 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 SLC23A1Q9UHI7 598 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 PNPLA7Q6ZV29 1317 aa4.21□□□□□ -1.73
HMGB1P41-201ENST00000520234 KLRG2A4D1S0 409 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 DIRC3C9JPN6 131 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 WNT10BO00744 389 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 CTNND1O60716 968 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 ATF3P18847 181 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 HK1P19367 917 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 SCNN1GP51170 649 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 MAP2K6P52564 334 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZNF280AP59817 542 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 DPTQ07507 201 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZNF267Q14586 743 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 RRP1BQ14684 758 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 UBXN2BQ14CS0 331 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 HSP90AB2PQ58FF8 381 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 Q6ZRM9 215 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 TMPRSS6Q8IU80 811 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 WDR75Q8IWA0 830 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 CAMKK1Q8N5S9 505 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 IL17RDQ8NFM7 739 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 OR10H5Q8NGA6 315 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 TTC8Q8TAM2 541 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 RAB24Q969Q5 203 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 RUNDC1Q96C34 613 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 CCDC136Q96JN2 1154 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 DCLRE1CQ96SD1 692 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 NDC1Q9BTX1 674 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZNF341Q9BYN7 854 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 REXO4Q9GZR2 422 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 IKZF4Q9H2S9 585 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 WDCPQ9H6R7 721 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZNF703Q9H7S9 590 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 ANLNQ9NQW6 1124 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 SIDT1Q9NXL6 827 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 RUVBL1Q9Y265 456 aaKnown RBP4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 STXBP5LQ9Y2K9 1186 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 XDHP47989 1333 aa4.21□□□□□ -1.74
HMGB1P41-201ENST00000520234 TRIM24O15164 1050 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 GRM6O15303 877 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 PRPF3O43395 683 aaKnown RBP4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 MARCH6O60337 910 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 RECQL4O94761 1208 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 RAP2BP61225 183 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 ABHD18Q0P651 414 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 SNAPC2Q13487 334 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 ARHGAP29Q52LW3 1261 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 CCDC157Q569K6 752 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 CCDC181Q5TID7 509 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 SLC4A10Q6U841 1118 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 HEATR3Q7Z4Q2 680 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 PALM2Q8IXS6 379 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 MTFMTQ96DP5 389 aaKnown RBP4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 CRAMP1Q96RY5 1269 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 CGRRF1Q99675 332 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 MYOCQ99972 504 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 VRK1Q99986 396 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 PACSIN1Q9BY11 444 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 FAM204AQ9H8W3 233 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 PRDM11Q9NQV5 511 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 LMBRD1Q9NUN5 540 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 PARPBPQ9NWS1 579 aa4.2□□□□□ -1.74
HMGB1P41-201ENST00000520234 TCRBV7S2A1N4TA0A589 114 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 DRGXA6NNA5 263 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 KIF3BO15066 747 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 KIAA0391O15091 583 aaKnown RBP4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 SLC43A1O75387 559 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 TUSC2O75896 110 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 UBXN7O94888 489 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 HAUS5O94927 633 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 ANXA1P04083 346 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 ALDH2P05091 517 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 CD1AP06126 327 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 TYRP14679 529 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 HLTFQ14527 1009 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 GBX1Q14549 363 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 C14orf80Q86SX3 495 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 FITM2Q8N6M3 262 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms