RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ZFPM1Q8IX07 1006 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 CAMKK1Q8N5S9 505 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 PLBD2Q8NHP8 589 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 FAM193BQ96PV7 902 aaPredicted RBP7.86□□□□□ -1.15
PTPN12-213ENST00000519553 ZNF703Q9H7S9 590 aaPredicted RBP7.86□□□□□ -1.15
PTPN12-213ENST00000519553 MAN1C1Q9NR34 630 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 LMBRD1Q9NUN5 540 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 ABCF2Q9UG63 623 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
PTPN12-213ENST00000519553 CDHR4A6H8M9 788 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 TRIM24O15164 1050 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 HAUS5O94927 633 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 PRSS23O95084 383 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 ARIH2O95376 493 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 ITGB1P05556 798 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 ADRB1P08588 477 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 MTHFD1P11586 935 aaKnown RBP7.85□□□□□ -1.15
PTPN12-213ENST00000519553 ALAS1P13196 640 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 TYRP14679 529 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 ATF3P18847 181 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 PRDX5P30044 214 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 BUD31P41223 144 aaPredicted RBP7.85□□□□□ -1.15
PTPN12-213ENST00000519553 GFOD2Q3B7J2 385 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 MED25Q71SY5 747 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 C1orf210Q8IVY1 113 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 SORCS3Q9UPU3 1222 aa7.85□□□□□ -1.15
PTPN12-213ENST00000519553 GOLGA6CA6NDK9 693 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 GOLGA6BA6NDN3 693 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 A6NNZ2 444 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 AHRRA9YTQ3 701 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 CTNND1O60716 968 aaKnown RBP7.84□□□□□ -1.15
PTPN12-213ENST00000519553 SLC43A1O75387 559 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 TUSC2O75896 110 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 FTH1P19P0C7X4 201 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 GOLGA6DP0CG33 693 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 HTR1BP28222 390 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 SLC25A3Q00325 362 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 RABL3Q5HYI8 236 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 AGAP9Q5VTM2 703 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 NLGN4YQ8NFZ3 816 aaPredicted RBP7.84□□□□□ -1.15
PTPN12-213ENST00000519553 KLHDC4Q8TBB5 520 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 CDK5RAP3Q96JB5 506 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 FAM167AQ96KS9 214 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 C8orf48Q96LL4 319 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 KRTAP4-9Q9BYQ8 210 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 GSTO2Q9H4Y5 243 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 C1orf112Q9NSG2 853 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 SIDT1Q9NXL6 827 aaKnown RBP7.84□□□□□ -1.15
PTPN12-213ENST00000519553 GOLGA6AQ9NYA3 693 aa7.84□□□□□ -1.15
PTPN12-213ENST00000519553 ZNF185O15231 689 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 GCSHP23434 173 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 RNASE9P60153 205 aaKnown RBP7.83□□□□□ -1.16
PTPN12-213ENST00000519553 GBX1Q14549 363 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 PLS1Q14651 629 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 ZNF365Q70YC5 407 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 RHOT2Q8IXI1 618 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 SLC35A4Q96G79 324 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 PHACTR3Q96KR7 559 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 C1orf43Q9BWL3 253 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 PACSIN1Q9BY11 444 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 TEX101Q9BY14 249 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 WDCPQ9H6R7 721 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 OBP2AQ9NY56 170 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 JKAMPQ9P055 326 aa7.83□□□□□ -1.16
PTPN12-213ENST00000519553 FEZ2Q9UHY8 353 aaPredicted RBP7.83□□□□□ -1.16
PTPN12-213ENST00000519553 EIF2B4Q9UI10 523 aaKnown RBP7.83□□□□□ -1.16
PTPN12-213ENST00000519553 FAM20BO75063 409 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 C1SP09871 688 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 SMARCA1P28370 1054 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 AGFG1P52594 562 aaKnown RBP7.82□□□□□ -1.16
PTPN12-213ENST00000519553 RAB1AP62820 205 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 SLFN5Q08AF3 891 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 GALEQ14376 348 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 GRM3Q14832 879 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 NRN1LQ496H8 165 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 ARHGAP29Q52LW3 1261 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 GDF7Q7Z4P5 450 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 SPRED1Q7Z699 444 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 PPP1R3BQ86XI6 285 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 SH2D3CQ8N5H7 860 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 CPT1CQ8TCG5 803 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 SH3RF3Q8TEJ3 882 aaPredicted RBP7.82□□□□□ -1.16
PTPN12-213ENST00000519553 CACTINQ8WUQ7 758 aaKnown RBP7.82□□□□□ -1.16
PTPN12-213ENST00000519553 DCLRE1CQ96SD1 692 aaKnown RBP7.82□□□□□ -1.16
PTPN12-213ENST00000519553 B3GNT5Q9BYG0 378 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 MRPL46Q9H2W6 279 aaKnown RBP7.82□□□□□ -1.16
PTPN12-213ENST00000519553 ZNF768Q9H5H4 540 aaKnown RBP7.82□□□□□ -1.16
PTPN12-213ENST00000519553 PNPOQ9NVS9 261 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 SLC45A2Q9UMX9 530 aa7.82□□□□□ -1.16
PTPN12-213ENST00000519553 A0A088AWK7 358 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 CCDC78A2IDD5 438 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 PRSS29PA6NIE9 313 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 DIRC3C9JPN6 131 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
PTPN12-213ENST00000519553 MATN4O95460 622 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 ZFP36P26651 326 aaKnown RBP7.81□□□□□ -1.16
PTPN12-213ENST00000519553 PIK3CGP48736 1102 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 FAM189BP81408 668 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 PDCD4Q53EL6 469 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms