RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 PPP4R3AQ6IN85 833 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 MAPKAPK5Q8IW41 473 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 CPA6Q8N4T0 437 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 FITM2Q8N6M3 262 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 HOOK2Q96ED9 719 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 MRGPRX4Q96LA9 322 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 CEP89Q96ST8 783 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
SKP1-205ENST00000519054 TYW1Q9NV66 732 aaKnown RBP4.9□□□□□ -1.63
SKP1-205ENST00000519054 A0A1B0GTW7 788 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 CCDC78A2IDD5 438 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 ALDH1L1O75891 902 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 CFIP05156 583 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 RPLP2P05387 115 aaKnown RBP4.89□□□□□ -1.63
SKP1-205ENST00000519054 CD1AP06126 327 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 HLA-DOAP06340 250 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 ELANEP08246 267 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 CKBP12277 381 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 FGFR4P22455 802 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 SLC6A4P31645 630 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 NOMO3P69849 1222 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 HSD11B2P80365 405 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 OCA2Q04671 838 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 TLE1Q04724 770 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 RAB39AQ14964 217 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 NOMO2Q5JPE7 1267 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 TMEM240Q5SV17 173 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 Q6ZPA2 131 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 TTC7BQ86TV6 843 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 LDLRAD3Q86YD5 345 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 ULK2Q8IYT8 1036 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 AMER2Q8N7J2 671 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 TBC1D15Q8TC07 691 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 NSUN6Q8TEA1 469 aaKnown RBP4.89□□□□□ -1.63
SKP1-205ENST00000519054 HSPBAP1Q96EW2 488 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 MARS2Q96GW9 593 aaKnown RBP4.89□□□□□ -1.63
SKP1-205ENST00000519054 DMRTA2Q96SC8 542 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 ADAM2Q99965 735 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 VRK1Q99986 396 aaPredicted RBP4.89□□□□□ -1.63
SKP1-205ENST00000519054 TTPALQ9BTX7 342 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 RNPEPQ9H4A4 650 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 IP6K2Q9UHH9 426 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 USP25Q9UHP3 1055 aa4.89□□□□□ -1.63
SKP1-205ENST00000519054 CFAP20Q9Y6A4 193 aaKnown RBP4.89□□□□□ -1.63
SKP1-205ENST00000519054 LRRC14BA6NHZ5 514 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 MARCH11A6NNE9 402 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 HAUS5O94927 633 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 MTHFD1P11586 935 aaKnown RBP4.88□□□□□ -1.63
SKP1-205ENST00000519054 KRT4P19013 534 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 PDCP20941 246 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 BMPR1AP36894 532 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 TGFB2P61812 414 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 MXRA7P84157 204 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 GUCY1B3Q02153 619 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 DSC2Q02487 901 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 DPTQ07507 201 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 FSTL1Q12841 308 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 TP53BP2Q13625 1128 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 KHDC1Q4VXA5 237 aaKnown RBP4.88□□□□□ -1.63
SKP1-205ENST00000519054 PABPC1LQ4VXU2 614 aaKnown RBP4.88□□□□□ -1.63
SKP1-205ENST00000519054 B3GNTL1Q67FW5 361 aaPredicted RBP4.88□□□□□ -1.63
SKP1-205ENST00000519054 CATIPQ7Z7H3 387 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 ARHGEF19Q8IW93 802 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 TMEM132CQ8N3T6 1108 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 NLGN4YQ8NFZ3 816 aaPredicted RBP4.88□□□□□ -1.63
SKP1-205ENST00000519054 RNF31Q96EP0 1072 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 WDR11Q9BZH6 1224 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 SERHL2Q9H4I8 314 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 CALCOCO1Q9P1Z2 691 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 DKK2Q9UBU2 259 aa4.88□□□□□ -1.63
SKP1-205ENST00000519054 TMEM191CA6NGB0 347 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 DTNBO60941 627 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 CDKL5O76039 1030 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 AGFG2O95081 481 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 SPDEFO95238 335 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 GPANK1O95872 356 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 ZEB1P37275 1124 aaPredicted RBP4.87□□□□□ -1.63
SKP1-205ENST00000519054 FXR1P51114 621 aaKnown RBP eCLIP4.87□□□□□ -1.63
SKP1-205ENST00000519054 INHBCP55103 352 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 SLFN5Q08AF3 891 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 TTF1Q15361 905 aaPredicted RBP4.87□□□□□ -1.63
SKP1-205ENST00000519054 SPDYE7PQ495Y7 208 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 FLYWCH1Q4VC44 716 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 UTP14CQ5TAP6 766 aaKnown RBP4.87□□□□□ -1.63
SKP1-205ENST00000519054 LAIR1Q6GTX8 287 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 FOXR2Q6PJQ5 311 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 MRGPRGQ86SM5 289 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 NUP133Q8WUM0 1156 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 CHFRQ96EP1 664 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 PRRX2Q99811 253 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 PACSIN1Q9BY11 444 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 ALOXE3Q9BYJ1 711 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 IKZF4Q9H2S9 585 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 RNF181Q9P0P0 153 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 HSFX1Q9UBD0 423 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 MTO1Q9Y2Z2 717 aaKnown RBP4.87□□□□□ -1.63
SKP1-205ENST00000519054 NOX1Q9Y5S8 564 aa4.87□□□□□ -1.63
SKP1-205ENST00000519054 RAMP2O60895 175 aa4.86□□□□□ -1.63
SKP1-205ENST00000519054 ERN1O75460 977 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms