RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	ECHS1	P30084	290 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	CDK17	Q00537	523 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	FSCN1	Q16658	493 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	ATP13A4	Q4VNC1	1196 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	ZNF529	Q6P280	563 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	FAM180A	Q6UWF9	173 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	AMIGO2	Q86SJ2	522 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	PEG10	Q86TG7	708 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	GPR156	Q8NFN8	814 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	LEO1	Q8WVC0	666 aa	Predicted RBP	3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	STON2	Q8WXE9	905 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	UBXN4	Q92575	508 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	DPF1	Q92782	380 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	FBXL20	Q96IG2	436 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	DRC1	Q96MC2	740 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	FEZ1	Q99689	392 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	DPP7	Q9UHL4	492 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	PLAA	Q9Y263	795 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	WNT6	Q9Y6F9	365 aa		3.89	□□□□□ -1.79
PCM1-208	ENST00000518877	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	CDC45	O75419	566 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	IGKV2-30	P06310	120 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	WT1	P19544	449 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	ITPKB	P27987	946 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	PTGER1	P34995	402 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	MAPK10	P53779	464 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	CCT2	P78371	535 aa	Known RBP	3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	MTX3	Q5HYI7	312 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	PQLC1	Q8N2U9	271 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	VGLL2	Q8N8G2	317 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	CLRN3	Q8NCR9	226 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	TFAP2B	Q92481	460 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	MARS2	Q96GW9	593 aa	Known RBP	3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	PNKP	Q96T60	521 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	SIK3	Q9Y2K2	1263 aa		3.88	□□□□□ -1.79
PCM1-208	ENST00000518877	NEMP1	O14524	444 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	ENPP1	P22413	925 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	SREBF1	P36956	1147 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	GRIA3	P42263	894 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	ALDH1A3	P47895	512 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	ID4	P47928	161 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	FCRLB	Q6BAA4	426 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	UBE3B	Q7Z3V4	1068 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	TSPEAR	Q8WU66	669 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	RAX2	Q96IS3	184 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	FCRL4	Q96PJ5	515 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	LANCL2	Q9NS86	450 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	FBXO34	Q9NWN3	711 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	FAM30A	Q9NZY2	134 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	SCOC	Q9UIL1	159 aa		3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	MRPL42	Q9Y6G3	142 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-208	ENST00000518877	TP73	O15350	636 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	MPPED1	O15442	326 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	ALAS1	P13196	640 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	SOX10	P56693	466 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	EIF2B5	Q13144	721 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	GRM1	Q13255	1194 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	LLGL1	Q15334	1064 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	DHCR24	Q15392	516 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	NBPF8	Q3BBV2	869 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	FAM153C	Q494X1	144 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	GJC2	Q5T442	439 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	JAZF1	Q86VZ6	243 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	CMIP	Q8IY22	773 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	FITM2	Q8N6M3	262 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	TOR1AIP2	Q8NFQ8	470 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	WASF1	Q92558	559 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	HOXB13	Q92826	284 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	ACAP3	Q96P50	834 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	MED15	Q96RN5	788 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	LDAH	Q9H6V9	325 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	TMEM140	Q9NV12	185 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	HSFX1	Q9UBD0	423 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	MAPRE3	Q9UPY8	281 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	ZNF804B	A4D1E1	1349 aa		3.86	□□□□□ -1.79
PCM1-208	ENST00000518877	KCNAB3	O43448	404 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	ZEB2	O60315	1214 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	PDE8A	O60658	829 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	PRR35	P0CG20	571 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	MYCLP1	P12525	358 aa	Predicted RBP	3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	SESN3	P58005	492 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	NOMO3	P69849	1222 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	MRPS9	P82933	396 aa	Known RBP	3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	PPP3CA	Q08209	521 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	SLC10A2	Q12908	348 aa	Predicted RBP	3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	NOMO1	Q15155	1222 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	ADRM1	Q16186	407 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	MUM1	Q2TAK8	710 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	NOMO2	Q5JPE7	1267 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	KIAA0895L	Q68EN5	471 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	OTUD7B	Q6GQQ9	843 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	VWA1	Q6PCB0	445 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	KCNK18	Q7Z418	384 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	NUP133	Q8WUM0	1156 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	USP7	Q93009	1102 aa		3.85	□□□□□ -1.79
PCM1-208	ENST00000518877	FATE1	Q969F0	183 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms