RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 HSDL1Q3SXM5 330 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 ATF7IP2Q5U623 682 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 MPZL3Q6UWV2 235 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 SLFN11Q7Z7L1 901 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 DNAAF5Q86Y56 855 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 ARHGEF26Q96DR7 871 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 SYT11Q9BT88 431 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 WNT8AQ9H1J5 351 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 ISCUQ9H1K1 167 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 GOLPH3Q9H4A6 298 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 SLITRK6Q9H5Y7 841 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 CNOT8Q9UFF9 292 aaKnown RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 MTUS1Q9ULD2 1270 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
SPIDR-204ENST00000517824 KIAA0100Q14667 2235 aaKnown RBP11.53□□□□□ -0.56
SPIDR-204ENST00000517824 FAM170AA1A519 330 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 GOLGA6BA6NDN3 693 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 THAP12O43422 761 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 SASH3O75995 380 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 LGALS2P05162 132 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CLTAP09496 248 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 GNA15P30679 374 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 MAPK4P31152 587 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 PLA2G4AP47712 749 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 TFAMQ00059 246 aaKnown RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 SLC7A5Q01650 507 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 FMO1Q01740 532 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 NNTQ13423 1086 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 MOGSQ13724 837 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 KYAT1Q16773 422 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 ZNF699Q32M78 642 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 Q3C1V9 767 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 ACAD10Q6JQN1 1059 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CCNI2Q6ZMN8 369 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 MAATS1Q7Z4T9 603 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 OR6J1Q8NGC5 347 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 PPTC7Q8NI37 304 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 IFT81Q8WYA0 676 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 COPS5Q92905 334 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 TATDN2Q93075 761 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 HES6Q96HZ4 224 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 ZBTB45Q96K62 511 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 RNPC3Q96LT9 517 aaKnown RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 FGD4Q96M96 766 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CCDC113Q9H0I3 377 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 RAB17Q9H0T7 212 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CARD9Q9H257 536 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 FAM53CQ9NYF3 392 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 L1RE1Q9UN81 338 aa11.52□□□□□ -0.57
SPIDR-204ENST00000517824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPIDR-204ENST00000517824 CEP290O15078 2479 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 CCDC66A2RUB6 948 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 BTBD19C9JJ37 291 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 MAP2K7O14733 419 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-204ENST00000517824 OPA1O60313 960 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 MTA2O94776 668 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 CLCN3P51790 818 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 CLDN10P78369 228 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 ARHGAP1Q07960 439 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 CUL1Q13616 776 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 TCEAL1Q15170 157 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 DUOXA2Q1HG44 320 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 TMEM270Q6UE05 265 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 C15orf39Q6ZRI6 1047 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 PLEKHH3Q7Z736 793 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 WHAMMQ8TF30 809 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 TRAPPC12Q8WVT3 735 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■■■■■ 50.8
SPIDR-204ENST00000517824 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 RUNDC3BQ96NL0 473 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 ACO2Q99798 780 aaKnown RBP11.51□□□□□ -0.57
SPIDR-204ENST00000517824 ADPGKQ9BRR6 497 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 NIF3L1Q9GZT8 377 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 EPB41L5Q9HCM4 733 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 MORF4L1Q9UBU8 362 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 STXBP5LQ9Y2K9 1186 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 PTPN22Q9Y2R2 807 aa11.51□□□□□ -0.57
SPIDR-204ENST00000517824 UTP11Q9Y3A2 253 aaKnown RBP11.51□□□□□ -0.57
SPIDR-204ENST00000517824 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms