RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 PDGFCQ9NRA1 345 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 FAM83GA6ND36 823 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 VWC2LB2RUY7 222 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 PATL2C9JE40 543 aaKnown RBP1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 LINC01565O15544 149 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 DNAJB5O75953 348 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 KRT37O76014 449 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 PCDH8O95206 1070 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 APOL3O95236 402 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 TOMM40O96008 361 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 CYP17A1P05093 508 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 PTX3P26022 381 aaPredicted RBP1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 FLT3LGP49771 235 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 GABREP78334 506 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 TROAPQ12815 778 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 RBMS2Q15434 407 aaKnown RBP1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 FAM47AQ5JRC9 791 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 PRAMEF14Q5SWL7 426 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 OTUD3Q5T2D3 398 aaPredicted RBP1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 TIGD7Q6NT04 549 aaPredicted RBP1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 ANKS3Q6ZW76 656 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 CAMKK1Q8N5S9 505 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 TOR1AIP2Q8NFQ8 470 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 SLC30A5Q8TAD4 765 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 GIPC2Q8TF65 315 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 FOXP1Q9H334 677 aaPredicted RBP1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 HSFX1Q9UBD0 423 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 PRKAG3Q9UGI9 489 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 PCDHB6Q9Y5E3 794 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 MYPNQ86TC9 1320 aa1.28□□□□□ -2.2
SCARNA23-201ENST00000516060 SMIM22K7EJ46 135 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 DIAPH1O60610 1272 aaKnown RBP1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 JTBO76095 146 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 TTLL1O95922 423 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 GASTP01350 101 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 SNRPA1P09661 255 aaKnown RBP1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 LTA4HP09960 611 aaKnown RBP1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 KCNA6P17658 529 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 GATA3P23771 443 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 HOXC13P31276 330 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 CCT8P50990 548 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 RAP2BP61225 183 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 ZXDBP98169 803 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 HOXA4Q00056 320 aaPredicted RBP1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 KRTAP24-1Q3LI83 254 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 TMEM177Q53S58 311 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 C19orf54Q5BKX5 351 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 LVRNQ6Q4G3 990 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 PDZD4Q76G19 769 aaPredicted RBP1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 NR2C2APQ86WQ0 139 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 PHYKPLQ8IUZ5 450 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 LRRC47Q8N1G4 583 aaKnown RBP1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 CDYL2Q8N8U2 506 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 C8orf58Q8NAV2 365 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 MYCBPAPQ8TBZ2 947 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 C5orf34Q96MH7 638 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 ZPBPQ9BS86 351 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 BCL2L13Q9BXK5 485 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 ANO3Q9BYT9 981 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 BCL11AQ9H165 835 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 POFUT1Q9H488 388 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 INTS13Q9NVM9 706 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 GPRC5DQ9NZD1 345 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 SH3BP4Q9P0V3 963 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 MCM8Q9UJA3 840 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 SIK3Q9Y2K2 1263 aa1.27□□□□□ -2.21
SCARNA23-201ENST00000516060 WDR17Q8IZU2 1322 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 H3BNX3 289 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 WNT10BO00744 389 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 URI1O94763 535 aaPredicted RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 CAMTA2O94983 1202 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 PLA2G2AP14555 144 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 SLC6A2P23975 617 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 ETFBP38117 255 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 KCNJ5P48544 419 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 MECP2P51608 486 aaKnown RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 SUMO1P63165 101 aaKnown RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 MGAT5Q09328 741 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 ASIC2Q16515 512 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 FAM209AQ5JX71 171 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 ESRP1Q6NXG1 681 aaKnown RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 CEP85Q6P2H3 762 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 ZNF549Q6P9A3 640 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 ABHD17CQ6PCB6 329 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 ABHD15Q6UXT9 468 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 METTL16Q86W50 562 aaKnown RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 DRC7Q8IY82 874 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 PELI3Q8N2H9 469 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 C7orf31Q8N865 590 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 MARS2Q96GW9 593 aaKnown RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 MED15Q96RN5 788 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 FAM30AQ9NZY2 134 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 SQORQ9Y6N5 450 aa1.26□□□□□ -2.21
SCARNA23-201ENST00000516060 TRBV23-1A0A0A0MS06 115 aa1.25□□□□□ -2.21
SCARNA23-201ENST00000516060 ZBTB7CA1YPR0 619 aa1.25□□□□□ -2.21
SCARNA23-201ENST00000516060 LACTBL1A8MY62 500 aa1.25□□□□□ -2.21
SCARNA23-201ENST00000516060 ELL2O00472 640 aaPredicted RBP1.25□□□□□ -2.21
SCARNA23-201ENST00000516060 ZNF213O14771 459 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms