RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 BEST2Q8NFU1 509 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 ARNTL2Q8WYA1 636 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 CEP63Q96MT8 703 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 C11orf84Q9BUA3 381 aaPredicted RBP16.34■□□□□ 0.21
PDCD6-211ENST00000515587 COLEC11Q9BWP8 271 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 PLVAPQ9BX97 442 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 CXCL16Q9H2A7 254 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 PDE11AQ9HCR9 933 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 SPG21Q9NZD8 308 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 HCSTQ9UBK5 93 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 DNAJB4Q9UDY4 337 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 C2CD2Q9Y426 696 aa16.34■□□□□ 0.21
PDCD6-211ENST00000515587 MEFVO15553 781 aaPredicted RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 ARHGEF15O94989 841 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 EPB41P11171 864 aaKnown RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 ERCC5P28715 1186 aaPredicted RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 SLC11A1P49279 550 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 PMS1P54277 932 aaKnown RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 KRT17Q04695 432 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 PSMD6Q15008 389 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 TTI2Q6NXR4 508 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 CCDC127Q96BQ5 260 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 DDX27Q96GQ7 796 aaKnown RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 MFSD14AQ96MC6 490 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 ZMAT2Q96NC0 199 aaKnown RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 MKNK1Q9BUB5 465 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 CERS4Q9HA82 394 aa16.33■□□□□ 0.2
PDCD6-211ENST00000515587 R3HCC1Q9Y3T6 440 aaKnown RBP16.33■□□□□ 0.2
PDCD6-211ENST00000515587 CASTOR2A6NHX0 329 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 C5orf67F2Z3F1 127 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 NRP1O14786 923 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 SLC16A3O15427 465 aaKnown RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 TNNC2P02585 160 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 GALTP07902 379 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 NFICP08651 508 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 TMEM191BP0C7N4 346 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 DLATP10515 647 aaKnown RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 CYP3A5P20815 502 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 RPL9P32969 192 aaKnown RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 CASP4P49662 377 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 TYRO3Q06418 890 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 NAB2Q15742 525 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 C18orf25Q96B23 403 aaPredicted RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 TMEM169Q96HH4 297 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 ANKRD36BP1Q96IX9 119 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 CGRRF1Q99675 332 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 NAT10Q9H0A0 1025 aaKnown RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 STK39Q9UEW8 545 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 PRG3Q9Y2Y8 225 aaPredicted RBP16.32■□□□□ 0.2
PDCD6-211ENST00000515587 XIRP2A4UGR9 3374 aa16.32■□□□□ 0.2
PDCD6-211ENST00000515587 PLXNA4Q9HCM2 1894 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 GPR37L1O60883 481 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 AKAP3O75969 853 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 LINC00271P0C7V0 271 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 TNNI1P19237 187 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 PBX3P40426 434 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 MRE11P49959 708 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 GPM6BQ13491 265 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 ZBTB6Q15916 424 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 DUOXA2Q1HG44 320 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 SPATA1Q5VX52 437 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 DCLRE1AQ6PJP8 1040 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 WDR49Q8IV35 697 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 ZC3H3Q8IXZ2 948 aaKnown RBP16.31■□□□□ 0.2
PDCD6-211ENST00000515587 SLC39A11Q8N1S5 342 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 KLHL23Q8NBE8 558 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 TMC2Q8TDI7 906 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
PDCD6-211ENST00000515587 DPP3Q9NY33 737 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
PDCD6-211ENST00000515587 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
PDCD6-211ENST00000515587 SYCE3A1L190 88 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 PODXLO00592 558 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 B4GALT3O60512 393 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 TADA2AO75478 443 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 FGF18O76093 207 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 GNA14O95837 355 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 CLCNKBP51801 687 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 VAMP7P51809 220 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 AP3M2P53677 418 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 SOX4Q06945 474 aaPredicted RBP16.3■□□□□ 0.2
PDCD6-211ENST00000515587 SKIV2LQ15477 1246 aaKnown RBP16.3■□□□□ 0.2
PDCD6-211ENST00000515587 AAK1Q2M2I8 961 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 IGSF21Q96ID5 467 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
PDCD6-211ENST00000515587 GOLGA2P5Q9HBQ8 144 aa16.3■□□□□ 0.2
PDCD6-211ENST00000515587 METTL14Q9HCE5 456 aaKnown RBP16.3■□□□□ 0.2
PDCD6-211ENST00000515587 INTS13Q9NVM9 706 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms