RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CPS1P31327 1500 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 B5MCH6 92 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 BCAR3O75815 825 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 SLPIP03973 132 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 LPLP06858 475 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 MGAT1P26572 445 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 MRPS9P82933 396 aaKnown RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 TOB2Q14106 344 aaPredicted RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 ALDH1L2Q3SY69 923 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 CT83Q5H943 113 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 KRT26Q7Z3Y9 468 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 LYSMD2Q8IV50 215 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 SLC41A1Q8IVJ1 513 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 AFAP1L2Q8N4X5 818 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 MSL3Q8N5Y2 521 aaKnown RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 UBR7Q8N806 425 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 ZNF480Q8WV37 535 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 EAF2Q96CJ1 260 aaPredicted RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 PGBD4Q96DM1 585 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 PLEKHF1Q96S99 279 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 PRRX2Q99811 253 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 TRIM8Q9BZR9 551 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 CHMP4BQ9H444 224 aaKnown RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 RWDD1Q9H446 243 aaPredicted RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 POGKQ9P215 609 aa4.62□□□□□ -1.67
CAST-242ENST00000515063 EDC4Q6P2E9 1401 aaKnown RBP4.62□□□□□ -1.67
CAST-242ENST00000515063 NRXN3Q9Y4C0 1643 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 GOLGA8AA7E2F4 631 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 FYB1O15117 783 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 STC2O76061 302 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 VIL1P09327 827 aaKnown RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 U2AF1L5P0DN76 240 aaPredicted RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 HK1P19367 917 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 CRHR1P34998 444 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 TMPOP42166 694 aaKnown RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 ID4P47928 161 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 INHBCP55103 352 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 U2AF1Q01081 240 aaKnown RBP eCLIP4.61□□□□□ -1.67
CAST-242ENST00000515063 APBA1Q02410 837 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 CALD1Q05682 793 aaKnown RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 KLF10Q13118 480 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 STAT4Q14765 748 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 PDCD1Q15116 288 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 VPS72Q15906 364 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 ANO4Q32M45 955 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 FAM214AQ32MH5 1076 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 ZNF276Q8N554 614 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 OR52N2Q8NGI0 321 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 NEU4Q8WWR8 484 aaPredicted RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 AUTS2Q8WXX7 1259 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 HAS1Q92839 578 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 PRAM1Q96QH2 718 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 MMRN2Q9H8L6 949 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 EIF2B4Q9UI10 523 aaKnown RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 MCM8Q9UJA3 840 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 RPTORQ8N122 1335 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 CPSF1Q10570 1443 aaKnown RBP4.61□□□□□ -1.67
CAST-242ENST00000515063 C3P01024 1663 aa4.61□□□□□ -1.67
CAST-242ENST00000515063 ITSN1Q15811 1721 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 KIF13AQ9H1H9 1805 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 TSPOAP1O95153 1857 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 TMEM191CA6NGB0 347 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 IPO8O15397 1037 aaKnown RBP4.6□□□□□ -1.67
CAST-242ENST00000515063 ITGA10O75578 1167 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 CTSSP25774 331 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 TMPRSS15P98073 1019 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 DPTQ07507 201 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 HDAC1Q13547 482 aaPredicted RBP4.6□□□□□ -1.67
CAST-242ENST00000515063 MVPQ14764 893 aaKnown RBP4.6□□□□□ -1.67
CAST-242ENST00000515063 ZKSCAN2Q63HK3 967 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 BTNL9Q6UXG8 535 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 STRA8Q7Z7C7 330 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 SPATS2Q86XZ4 545 aaKnown RBP4.6□□□□□ -1.67
CAST-242ENST00000515063 WDR66Q8TBY9 1149 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 ARHGAP45Q92619 1136 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 FATE1Q969F0 183 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 CLIP3Q96DZ5 547 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
CAST-242ENST00000515063 CDK19Q9BWU1 502 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 BRINP2Q9C0B6 783 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 SLITRK6Q9H5Y7 841 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 NRDE2Q9H7Z3 1164 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 GPRC5DQ9NZD1 345 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 TRPS1Q9UHF7 1281 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 DPP7Q9UHL4 492 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 DDX19BQ9UMR2 479 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 SORCS3Q9UPU3 1222 aa4.6□□□□□ -1.67
CAST-242ENST00000515063 CDK12Q9NYV4 1490 aaPredicted RBP4.6□□□□□ -1.67
CAST-242ENST00000515063 DIRC3C9JPN6 131 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 EIF5BO60841 1220 aaKnown RBP4.59□□□□□ -1.67
CAST-242ENST00000515063 TMEM127O75204 238 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 SCAF4O95104 1147 aaKnown RBP4.59□□□□□ -1.67
CAST-242ENST00000515063 IGHDP01880 384 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 SLC5A3P53794 718 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 ANAPC15P60006 121 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 LMOD3Q0VAK6 560 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 LY6G5CQ5SRR4 150 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 KIF24Q5T7B8 1368 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 FNDC7Q5VTL7 733 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 C1QL3Q5VWW1 255 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms