RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 CORO1BQ9BR76 489 aa14.44□□□□□ -0.1
SMAD5-209ENST00000514777 TRMT61BQ9BVS5 477 aaKnown RBP14.44□□□□□ -0.1
SMAD5-209ENST00000514777 CCDC113Q9H0I3 377 aa14.44□□□□□ -0.1
SMAD5-209ENST00000514777 GOLGA2P5Q9HBQ8 144 aa14.44□□□□□ -0.1
SMAD5-209ENST00000514777 TRPV5Q9NQA5 729 aa14.44□□□□□ -0.1
SMAD5-209ENST00000514777 PCDHA12Q9UN75 941 aa14.44□□□□□ -0.1
SMAD5-209ENST00000514777 SPAG17Q6Q759 2223 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 CHURC1-FNTBB4DL54 471 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 WNT7AO00755 349 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 MICAL2O94851 1124 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 SPATA31C1P0DKV0 1188 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 XRCC6P12956 609 aaKnown RBP eCLIP14.43□□□□□ -0.1
SMAD5-209ENST00000514777 CXCL12P48061 93 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 FNTBP49356 437 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 CCR3P51677 355 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 SOX4Q06945 474 aaPredicted RBP14.43□□□□□ -0.1
SMAD5-209ENST00000514777 SIM2Q14190 667 aaPredicted RBP14.43□□□□□ -0.1
SMAD5-209ENST00000514777 GLRA4Q5JXX5 417 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 ANKS3Q6ZW76 656 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 TNFRSF25Q93038 417 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 IER2Q9BTL4 223 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 TTC12Q9H892 705 aaPredicted RBP14.43□□□□□ -0.1
SMAD5-209ENST00000514777 RALYQ9UKM9 306 aaKnown RBP14.43□□□□□ -0.1
SMAD5-209ENST00000514777 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
SMAD5-209ENST00000514777 KIF26AQ9ULI4 1882 aaPredicted RBP14.43□□□□□ -0.1
SMAD5-209ENST00000514777 ATG2BQ96BY7 2078 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 K7ESF4 209 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 ARNTLO00327 626 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 ACKR2O00590 384 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 PSMC3P17980 439 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 CCNE1P24864 410 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 GDI1P31150 447 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 VIPR2P41587 438 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 SCRN1Q12765 414 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 NR5A1Q13285 461 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 PRPF4BQ13523 1007 aaKnown RBP14.42□□□□□ -0.1
SMAD5-209ENST00000514777 MRPL58Q14197 206 aaKnown RBP14.42□□□□□ -0.1
SMAD5-209ENST00000514777 IRF7Q92985 503 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 C2orf42Q9NWW7 574 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 PIAS3Q9Y6X2 628 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 CITO14578 2027 aa14.42□□□□□ -0.1
SMAD5-209ENST00000514777 TM4SF5O14894 197 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 LRG1P02750 347 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 PRKCBP05771 671 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 ATF2P15336 505 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 PTGDRQ13258 359 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 PPP2R5DQ14738 602 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 N4BP2L1Q5TBK1 243 aaPredicted RBP14.41□□□□□ -0.1
SMAD5-209ENST00000514777 NT5DC1Q5TFE4 455 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 CPLX2Q6PUV4 134 aaKnown RBP14.41□□□□□ -0.1
SMAD5-209ENST00000514777 ALKAL1Q6UXT8 129 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 TCEAL8Q8IYN2 117 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 SMARCD2Q92925 531 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 MTMR9Q96QG7 549 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 TRPV4Q9HBA0 871 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 CYP4F11Q9HBI6 524 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 RBM12Q9NTZ6 932 aaKnown RBP14.41□□□□□ -0.1
SMAD5-209ENST00000514777 CEP72Q9P209 647 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 EML5Q05BV3 1969 aa14.41□□□□□ -0.1
SMAD5-209ENST00000514777 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 PRRG1O14668 218 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 ZNF197O14709 1029 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 PAPSS2O95340 614 aaPredicted RBP14.4□□□□□ -0.1
SMAD5-209ENST00000514777 CTDNEP1O95476 244 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 GJA1P17302 382 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 ATP2B1P20020 1258 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 PMLP29590 882 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 ELF1P32519 619 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 TXKP42681 527 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 ARPP19P56211 112 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 CALCRLQ16602 461 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 MAPK6Q16659 721 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 CATSPER3Q86XQ3 398 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 MFSD6LQ8IWD5 586 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 SPEM1Q8N4L4 309 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 RSPRY1Q96DX4 576 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 UROC1Q96N76 676 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 ADPGKQ9BRR6 497 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 POLD4Q9HCU8 107 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 INSL5Q9Y5Q6 135 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 CYP46A1Q9Y6A2 500 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
SMAD5-209ENST00000514777 ZNF263O14978 683 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 TRAPPC3O43617 180 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 MED24O75448 989 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 LIG1P18858 919 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 CNR2P34972 360 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 EPHA5P54756 1037 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
SMAD5-209ENST00000514777 XKR4Q5GH76 650 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 Q6ZS52 159 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 PDZD4Q76G19 769 aaPredicted RBP14.39□□□□□ -0.11
SMAD5-209ENST00000514777 LONP2Q86WA8 852 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 FAM160A2Q8N612 972 aaPredicted RBP14.39□□□□□ -0.11
SMAD5-209ENST00000514777 CEP120Q8N960 986 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 MCPH1Q8NEM0 835 aa14.39□□□□□ -0.11
SMAD5-209ENST00000514777 DEPDC1BQ8WUY9 529 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms