RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SLC6A2P23975 617 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 PURAQ00577 322 aaKnown RBP6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 CREMQ03060 361 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 CNN3Q15417 329 aaKnown RBP6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 ATXN7L2Q5T6C5 722 aaPredicted RBP6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 Q6ZRM9 215 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 MIEF2Q96C03 454 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 MRPL46Q9H2W6 279 aaKnown RBP6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 SLC45A2Q9UMX9 530 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 FAM50BQ9Y247 325 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 KLRG2A4D1S0 409 aaPredicted RBP6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 MFAP3LO75121 409 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 MYL1P05976 194 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 MTHFD1P11586 935 aaKnown RBP6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 FGL2Q14314 439 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 UBXN2BQ14CS0 331 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 VPS72Q15906 364 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 COBLL1Q53SF7 1204 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 DRICH1Q6PGQ1 229 aaPredicted RBP6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 APOA5Q6Q788 366 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 MAEAQ7L5Y9 396 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 SGMS1Q86VZ5 419 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 CCAR1Q8IX12 1150 aaKnown RBP6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 OR10H5Q8NGA6 315 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 ZFP28Q8NHY6 868 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 ATXN2LQ8WWM7 1075 aaKnown RBP6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 TTC17Q96AE7 1141 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 C22orf23Q9BZE7 217 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 CHST12Q9NRB3 414 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 ST6GALNAC2Q9UJ37 374 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 PCDHGB6Q9Y5F9 930 aa6.5□□□□□ -1.37
HMGCS1-207ENST00000514610 SLC43A1O75387 559 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 PRSS23O95084 383 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 MATN4O95460 622 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 POMCP01189 267 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 AMHP03971 560 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 PIK3CGP48736 1102 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 SCNN1GP51170 649 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 FAM193AP78312 1265 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 ATP2B3Q16720 1220 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 CCDC93Q567U6 631 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 DCAF17Q5H9S7 520 aaPredicted RBP6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 METTL24Q5JXM2 366 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 METRNLQ641Q3 311 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 EFCAB12Q6NXP0 572 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 HTR3DQ70Z44 454 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 ANKRD35Q8N283 1001 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 PJA1Q8NG27 643 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 CXorf38Q8TB03 319 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 PGBD4Q96DM1 585 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 MTFMTQ96DP5 389 aaKnown RBP6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 MRGPRX1Q96LB2 322 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 NEU1Q99519 415 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 GSTO2Q9H4Y5 243 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 SIDT1Q9NXL6 827 aaKnown RBP6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 CPA4Q9UI42 421 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 PCDHA6Q9UN73 950 aa6.49□□□□□ -1.37
HMGCS1-207ENST00000514610 CDHR4A6H8M9 788 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 DRGXA6NNA5 263 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 LEFTY2O00292 366 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 HAUS5O94927 633 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 ITGB1P05556 798 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 NPR1P16066 1061 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 PHKA1P46020 1223 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 CHN2P52757 468 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 GPSM2P81274 684 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 HHEXQ03014 270 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 RNF220Q5VTB9 566 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 ZNF365Q70YC5 407 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 TNPO1Q92973 898 aaKnown RBP6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 LOXL4Q96JB6 756 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 MNTQ99583 582 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 PACSIN1Q9BY11 444 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 SLAMF7Q9NQ25 335 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 JKAMPQ9P055 326 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 POGKQ9P215 609 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 RAPGEFL1Q9UHV5 662 aa6.48□□□□□ -1.37
HMGCS1-207ENST00000514610 CFAP69A5D8W1 941 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 PMM2O15305 246 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 ALAS1P13196 640 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 SLC5A1P13866 664 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 HDCP19113 662 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 PEX2P28328 305 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 EXOSC9Q06265 439 aaKnown RBP6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 ZNF585AQ6P3V2 769 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 DARS2Q6PI48 645 aaKnown RBP6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 MED25Q71SY5 747 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 ZFPM1Q8IX07 1006 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 IL31RAQ8NI17 732 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 BRIX1Q8TDN6 353 aaKnown RBP6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 LRTOMTQ8WZ04 291 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 EDAQ92838 391 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 FAM89AQ96GI7 184 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 APOL5Q9BWW9 433 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms