RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 WNT7BP56706 349 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 DUSP6Q16828 381 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 SPATA1Q5VX52 437 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 KIAA1841Q6NSI8 718 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 CBWD2Q8IUF1 395 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 BRSK2Q8IWQ3 736 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 SMYD4Q8IYR2 804 aaPredicted RBP15.14■□□□□ 0.01
USP46-209ENST00000514536 BEST2Q8NFU1 509 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 SPATA20Q8TB22 786 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 HLA-CQ95604 372 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 KIAA1586Q9HCI6 787 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 MRPL17Q9NRX2 175 aaKnown RBP15.14■□□□□ 0.01
USP46-209ENST00000514536 CLDND1Q9NY35 253 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 DERAQ9Y315 318 aa15.14■□□□□ 0.01
USP46-209ENST00000514536 TDRD15B5MCY1 1934 aaKnown RBP15.14■□□□□ 0.01
USP46-209ENST00000514536 SF3B1O75533 1304 aaKnown RBP eCLIP15.14■□□□□ 0.014e-7■■■■■ 133.7
USP46-209ENST00000514536 LINC01565O15544 149 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 NCK2O43639 380 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 LILRB3O75022 631 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 URODP06132 367 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 LRPAP1P30533 357 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 BRCC3P46736 316 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 GLUD2P49448 558 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 ADAM15Q13444 863 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 USP41Q3LFD5 358 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 FAM171A1Q5VUB5 890 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 KIAA0319Q5VV43 1072 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 CEP57Q86XR8 500 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 FBXL18Q96ME1 805 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 PDE11AQ9HCR9 933 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 CHST7Q9NS84 486 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 IRAK3Q9Y616 596 aa15.13■□□□□ 0.01
USP46-209ENST00000514536 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 I3L4J1 428 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 PDXKO00764 312 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 CLASP2O75122 1294 aaKnown RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 DSG1Q02413 1049 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 CAMK4Q16566 473 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 ZNF658Q5TYW1 1059 aaPredicted RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 EFCAB13Q8IY85 973 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 GUF1Q8N442 669 aaKnown RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 EFHBQ8N7U6 833 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 RIN2Q8WYP3 895 aaPredicted RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 PABPC5Q96DU9 382 aaKnown RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 UBE2ZQ9H832 354 aaPredicted RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 DPP3Q9NY33 737 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 COG5Q9UP83 839 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 C2CD2Q9Y426 696 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 NUB1Q9Y5A7 615 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.12■□□□□ 0.01
USP46-209ENST00000514536 TRIP11Q15643 1979 aa15.12■□□□□ 0.01
USP46-209ENST00000514536 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 CALUO43852 315 aaPredicted RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 EXOC3O60645 756 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 RBM10P98175 930 aaKnown RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 TFAMQ00059 246 aaKnown RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 TFF2Q03403 129 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 COL19A1Q14993 1142 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 SNRNP35Q16560 246 aaKnown RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 CTC1Q2NKJ3 1217 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 KLHL5Q96PQ7 755 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 TTPALQ9BTX7 342 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 EMILIN2Q9BXX0 1053 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 DMAC2Q9NW81 257 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 THEGQ9P2T0 379 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 MAN1B1Q9UKM7 699 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 CITO14578 2027 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 PPEF2O14830 753 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 NR3C1P04150 777 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 CNPP09543 421 aaKnown RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 KCNA5P22460 613 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 KLRC2P26717 231 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 MCM4P33991 863 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 LTBRP36941 435 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 PRCPP42785 496 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 DLX2Q07687 328 aaPredicted RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 TJAP1Q5JTD0 557 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 RTP2Q5QGT7 225 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 C9orf57Q5W0N0 161 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 LLGL2Q6P1M3 1020 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 PRSS55Q6UWB4 352 aaPredicted RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 NT5DC4Q86YG4 428 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 SLC9A9Q8IVB4 645 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 VN1R2Q8NFZ6 395 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
USP46-209ENST00000514536 FAM84AQ96KN4 292 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
USP46-209ENST00000514536 BIN1O00499 593 aa15.1■□□□□ 0.01
USP46-209ENST00000514536 GLP2RO95838 553 aa15.1■□□□□ 0.01
USP46-209ENST00000514536 RPL17P18621 184 aaKnown RBP15.1■□□□□ 0.01
USP46-209ENST00000514536 FGFR3P22607 806 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms