RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 PTGIRP43119 386 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 KCNJ1P48048 391 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 TCEAL1Q15170 157 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 DENND2CQ68D51 928 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 CYFIP1Q7L576 1253 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
SDHA-216ENST00000514027 SPIRE2Q8WWL2 714 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDHA-216ENST00000514027 SLC9A2Q9UBY0 812 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 TLDC2A0PJX2 215 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 MGRN1O60291 552 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 DGAT1O75907 488 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 RGS20O76081 388 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 MTA2O94776 668 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 GMPSP49915 693 aaPredicted RBP13.4□□□□□ -0.26
SDHA-216ENST00000514027 LIG4P49917 911 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 ZDHHC24Q6UX98 284 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 SLC13A5Q86YT5 568 aaPredicted RBP13.4□□□□□ -0.26
SDHA-216ENST00000514027 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 MCPH1Q8NEM0 835 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 CD101Q93033 1021 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 XPNPEP1Q9NQW7 623 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 CHCHD3Q9NX63 227 aaKnown RBP13.4□□□□□ -0.26
SDHA-216ENST00000514027 UVRAGQ9P2Y5 699 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
SDHA-216ENST00000514027 CORO1CQ9ULV4 474 aaPredicted RBP13.4□□□□□ -0.26
SDHA-216ENST00000514027 PARP14Q460N5 1801 aa13.4□□□□□ -0.27
SDHA-216ENST00000514027 DOCK1Q14185 1865 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 CLDN3O15551 220 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 GGPS1O95749 300 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 TNNI1P19237 187 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 FGFR4P22455 802 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 MAPK4P31152 587 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 ZNF280AP59817 542 aaPredicted RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 ACTR2P61160 394 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 XRCC4Q13426 336 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 CLEC16AQ2KHT3 1053 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 ACAD10Q6JQN1 1059 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 XRRA1Q6P2D8 792 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 HOOK3Q86VS8 718 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 CCDC25Q86WR0 208 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 CPA5Q8WXQ8 436 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 DDX1Q92499 740 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 FBXL18Q96ME1 805 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 TXLNGYQ9BZA5 131 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 AS3MTQ9HBK9 375 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 MTRF1LQ9UGC7 380 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 PCYOX1Q9UHG3 505 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 SLC12A6Q9UHW9 1150 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 PHIPQ8WWQ0 1821 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
SDHA-216ENST00000514027 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 FDX1P10109 184 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 RARAP10276 462 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 SSTR3P32745 418 aaPredicted RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 COILP38432 576 aaPredicted RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 PIK3CAP42336 1068 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 ACOT2P49753 483 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 POLGP54098 1239 aaPredicted RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 PPP1R7Q15435 360 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 SPRED3Q2MJR0 410 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 ANKRD20A8PQ5CZ79 823 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 UBAP2Q5T6F2 1119 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 LLGL2Q6P1M3 1020 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 TAS1R3Q7RTX0 852 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 MFN1Q8IWA4 741 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 SENP7Q9BQF6 1050 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 YIPF3Q9GZM5 350 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
SDHA-216ENST00000514027 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
SDHA-216ENST00000514027 PODXLO00592 558 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 STBD1O95210 358 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 FAM107AO95990 144 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 PTPRAP18433 802 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms