RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 C11orf63Q6NUN7 778 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 TLK2Q86UE8 772 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
VCAN-211ENST00000513984 EFCAB13Q8IY85 973 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 UBR7Q8N806 425 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 FAM212AQ96EL1 285 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 MS4A14Q96JA4 679 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 APBA2Q99767 749 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 ZFYVE28Q9HCC9 887 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 GTF3C4Q9UKN8 822 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 AMFRQ9UKV5 643 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 PDCD11Q14690 1871 aaKnown RBP16.02■□□□□ 0.16
VCAN-211ENST00000513984 KCNK3O14649 394 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 ERLIN1O75477 346 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.16
VCAN-211ENST00000513984 CYP1A2P05177 515 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 MCM3P25205 808 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 CCL14Q16627 93 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 ACAD10Q6JQN1 1059 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 NLRP7Q8WX94 980 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 RUBCNQ92622 972 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 KAT2BQ92831 832 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 PPP1R16BQ96T49 567 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 RPF1Q9H9Y2 349 aaKnown RBP16.02■□□□□ 0.16
VCAN-211ENST00000513984 TLL2Q9Y6L7 1015 aa16.02■□□□□ 0.16
VCAN-211ENST00000513984 NRCAMQ92823 1304 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CSDE1O75534 798 aaKnown RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 SEC31AO94979 1220 aaKnown RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CXCL8P10145 99 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 UNGP13051 313 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 ARF4P18085 180 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 SREBF2Q12772 1141 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 KYAT1Q16773 422 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 SGSM1Q2NKQ1 1148 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 SCARA3Q6AZY7 606 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 ACTRT1Q8TDG2 376 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 RBM12Q9NTZ6 932 aaKnown RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 FAM53CQ9NYF3 392 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CTTNBP2NLQ9P2B4 639 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 Q9Y3F1 56 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 PCDHB4Q9Y5E5 795 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 MBLAC1A4D2B0 266 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 TSPAN1O60635 241 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 TNNC2P02585 160 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CYP1A1P04798 512 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 SMIM10L2AP0DMW4 78 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 SMIM10L2BP0DMW5 78 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CYP2B6P20813 491 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 CYP2C19P33261 490 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 ZNF132P52740 706 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 MYL6P60660 151 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 OSTNP61366 133 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 TFAMQ00059 246 aaKnown RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 TMEM270Q6UE05 265 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 TMEM192Q8IY95 271 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 USP38Q8NB14 1042 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 RBBP8NLQ8NC74 664 aaPredicted RBP16.01■□□□□ 0.15
VCAN-211ENST00000513984 UBE2Q2Q8WVN8 375 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 SELENOOQ9BVL4 669 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 SETD4Q9NVD3 440 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 UVRAGQ9P2Y5 699 aa16.01■□□□□ 0.15
VCAN-211ENST00000513984 TBC1D8O95759 1140 aa16■□□□□ 0.15
VCAN-211ENST00000513984 CALCAP01258 141 aa16■□□□□ 0.15
VCAN-211ENST00000513984 STAG3L1P0CL83 205 aa16■□□□□ 0.15
VCAN-211ENST00000513984 CRHR2Q13324 411 aa16■□□□□ 0.15
VCAN-211ENST00000513984 TRPC3Q13507 836 aa16■□□□□ 0.15
VCAN-211ENST00000513984 LONRF2Q1L5Z9 754 aa16■□□□□ 0.15
VCAN-211ENST00000513984 BEND6Q5SZJ8 279 aaPredicted RBP16■□□□□ 0.15
VCAN-211ENST00000513984 TRIM72Q6ZMU5 477 aa16■□□□□ 0.15
VCAN-211ENST00000513984 RASGEF1CQ8N431 466 aa16■□□□□ 0.15
VCAN-211ENST00000513984 CCDC102AQ96A19 550 aa16■□□□□ 0.15
VCAN-211ENST00000513984 ZNF653Q96CK0 615 aa16■□□□□ 0.15
VCAN-211ENST00000513984 CPB2Q96IY4 423 aa16■□□□□ 0.15
VCAN-211ENST00000513984 SCLT1Q96NL6 688 aa16■□□□□ 0.15
VCAN-211ENST00000513984 XYLT2Q9H1B5 865 aa16■□□□□ 0.15
VCAN-211ENST00000513984 OGFRQ9NZT2 677 aa16■□□□□ 0.15
VCAN-211ENST00000513984 TMEM59LQ9UK28 342 aa16■□□□□ 0.15
VCAN-211ENST00000513984 CASP8AP2Q9UKL3 1982 aa16■□□□□ 0.15
VCAN-211ENST00000513984 FAM170AA1A519 330 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 HAS3O00219 553 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 TNPO2O14787 897 aaKnown RBP15.99■□□□□ 0.15
VCAN-211ENST00000513984 DDX3YO15523 660 aaKnown RBP15.99■□□□□ 0.15
VCAN-211ENST00000513984 MEFVO15553 781 aaPredicted RBP15.99■□□□□ 0.15
VCAN-211ENST00000513984 ERLIN2O94905 339 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 GNA15P30679 374 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 CPT1AP50416 773 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 CDC42EP1Q00587 391 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 CENPCQ03188 943 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 PTPROQ16827 1216 aa15.99■□□□□ 0.15
VCAN-211ENST00000513984 GLE1Q53GS7 698 aaKnown RBP15.99■□□□□ 0.15
VCAN-211ENST00000513984 LENG1Q96BZ8 264 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms