RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 CLCNKBP51801 687 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 AP3M2P53677 418 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 MARSP56192 900 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 KRT17Q04695 432 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 DPCR1Q3MIW9 517 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 SPOUT1Q5T280 376 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 INTS8Q75QN2 995 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 FILIP1Q7Z7B0 1213 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 BEST2Q8NFU1 509 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 PLEKHO2Q8TD55 490 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 MRPL38Q96DV4 380 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 GUCD1Q96NT3 240 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 CGRRF1Q99675 332 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 ADAM28Q9UKQ2 775 aa16.82■□□□□ 0.28
POLR2J3-218ENST00000513506 CITO14578 2027 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 LILRB3O75022 631 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 DNAJB1P25685 340 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 PBX3P40426 434 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 OR1G1P47890 313 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 ADGRE1Q14246 886 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 DUOXA2Q1HG44 320 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 C1orf220Q5T0J3 134 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 TMEM169Q96HH4 297 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 CDX2Q99626 313 aaPredicted RBP16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 PRDM12Q9H4Q4 367 aa16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 NGRNQ9NPE2 291 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-218ENST00000513506 PTPRJQ12913 1337 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 TRIM49BA6NDI0 452 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 CASTOR2A6NHX0 329 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 NT5C1B-RDH14C9J2C7 533 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 PODXLO00592 558 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 KIF4AO95239 1232 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 C1RP00736 705 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 SOD2P04179 222 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 ELAVL2Q12926 359 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 PTPROQ16827 1216 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 C9orf57Q5W0N0 161 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 C15orf39Q6ZRI6 1047 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 Q7L0L9 218 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 USP37Q86T82 979 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 C1orf127Q8N9H9 656 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 RDH13Q8NBN7 331 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 C3orf58Q8NDZ4 430 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 CERS4Q9HA82 394 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 GOLGA2P5Q9HBQ8 144 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 ALG13Q9NP73 1137 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 ITGA11Q9UKX5 1188 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 MTCH2Q9Y6C9 303 aa16.8■□□□□ 0.28
POLR2J3-218ENST00000513506 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 F8W810 466 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 M0QZQ0 153 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 PMM2O15305 246 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 TRAPPC3O43617 180 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 B3GAT3O94766 335 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 STAU1O95793 577 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 GNA14O95837 355 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 CTSAP10619 480 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 IGFBP6P24592 240 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 GTF2H1P32780 548 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 SPAG1Q07617 926 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 BFSP1Q12934 665 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 COL19A1Q14993 1142 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 KIAA0319Q5VV43 1072 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 OR5B17Q8NGF7 314 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 POF1BQ8WVV4 589 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 SUSD3Q96L08 255 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 FNBP1Q96RU3 617 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 HERC2P3Q9BVR0 1158 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 GPR62Q9BZJ7 368 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 ZBP1Q9H171 429 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 METTL14Q9HCE5 456 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 CTNND2Q9UQB3 1225 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 KIAA1671Q9BY89 1806 aa16.79■□□□□ 0.28
POLR2J3-218ENST00000513506 LRRIQ3A6PVS8 624 aaPredicted RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 RFXAPO00287 272 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 TADA2AO75478 443 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 C4BPAP04003 597 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 FGFR3P22607 806 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 VAMP7P51809 220 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 LILRA4P59901 499 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms