RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 DDHD2O94830 711 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 TRIM49P0CI25 452 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 TRIM49CP0CI26 452 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 PAX3P23760 479 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 PNPLA4P41247 253 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 BCAR1P56945 870 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 CLDN10P78369 228 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 DSC1Q08554 894 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 ZBTB6Q15916 424 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 PPP2R2DQ66LE6 453 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 LMBRD2Q68DH5 695 aaPredicted RBP17■□□□□ 0.31
SH3TC1-223ENST00000513495 ZNF280BQ86YH2 543 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 CCDC150Q8NCX0 1101 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 GBF1Q92538 1859 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
SH3TC1-223ENST00000513495 BORCS6Q96GS4 357 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 ZNF560Q96MR9 790 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 TGS1Q96RS0 853 aaKnown RBP17■□□□□ 0.31
SH3TC1-223ENST00000513495 POP1Q99575 1024 aaKnown RBP17■□□□□ 0.31
SH3TC1-223ENST00000513495 CXCL16Q9H2A7 254 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 CWH43Q9H720 699 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
SH3TC1-223ENST00000513495 STK39Q9UEW8 545 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 TUBGCP4Q9UGJ1 667 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 LCHNA4D1U4 455 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 PES1O00541 588 aaKnown RBP16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 PODXLO00592 558 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 KRT19P08727 400 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 DNAJB2P25686 324 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 LRPAP1P30533 357 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 CTNNB1P35222 781 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 WNT7BP56706 349 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 DLG4P78352 724 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 RBP5P82980 135 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 MYO1EQ12965 1108 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 MAN2A1Q16706 1144 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 HSP90AA4PQ58FG1 418 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 TCP11X2Q5H9J9 407 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 CDKAL1Q5VV42 579 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 KRT39Q6A163 491 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 DCLRE1AQ6PJP8 1040 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 KCNT2Q6UVM3 1135 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 TRAPPC11Q7Z392 1133 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 TRIM59Q8IWR1 403 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 CLP1Q92989 425 aaKnown RBP16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 TIFAQ96CG3 184 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 TMEM169Q96HH4 297 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 PLVAPQ9BX97 442 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 IMPG2Q9BZV3 1241 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 NKX2-4Q9H2Z4 354 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 TMEM8AQ9HCN3 771 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 SPG21Q9NZD8 308 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 DNAJB4Q9UDY4 337 aa16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 PRG3Q9Y2Y8 225 aaPredicted RBP16.99■□□□□ 0.31
SH3TC1-223ENST00000513495 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 TRAPPC3O43617 180 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 TADA2AO75478 443 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 B3GAT3O94766 335 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 AFPP02771 609 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 ITGB3P05106 788 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 GALTP07902 379 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 MYOGP15173 224 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 PBX2P40425 430 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 GCLMP48507 274 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 SLC11A1P49279 550 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 MXI1P50539 228 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 KRT17Q04695 432 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 IQCB1Q15051 598 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 NAB2Q15742 525 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 LUZP1Q86V48 1076 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 OR5B17Q8NGF7 314 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 SLC35C1Q96A29 364 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 TUBGCP2Q9BSJ2 902 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 GOLGA2P5Q9HBQ8 144 aa16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 YBX2Q9Y2T7 364 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-223ENST00000513495 NRP1O14786 923 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 RB1P06400 928 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 POLR2BP30876 1174 aaKnown RBP16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 BMPR1AP36894 532 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 PIK3CAP42336 1068 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 CLCNKBP51801 687 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 MCCD1P59942 119 aaPredicted RBP16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 ELAVL2Q12926 359 aaKnown RBP16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 NCAPHQ15003 741 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 UPP1Q16831 310 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 ZACNQ401N2 412 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 SV2CQ496J9 727 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 C9orf57Q5W0N0 161 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 SV2AQ7L0J3 742 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 IRF2BP1Q8IU81 584 aa16.97■□□□□ 0.31
SH3TC1-223ENST00000513495 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms