RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CPLX1O14810 134 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 TRAPPC3O43617 180 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 RECQL4O94761 1208 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 PAPSS2O95340 614 aaPredicted RBP15.36■□□□□ 0.05
SPCS3-204ENST00000513139 LRG1P02750 347 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 PSMC3P17980 439 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 PSMA5P28066 241 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 HSPA4P34932 840 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 LIMK1P53667 647 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 SHC2P98077 582 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 FAM78AQ5JUQ0 283 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 C1orf228Q6PIY5 440 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 SPEM1Q8N4L4 309 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 MS4A3Q96HJ5 214 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 ASB16Q96NS5 453 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 EIF2AK1Q9BQI3 630 aaKnown RBP15.36■□□□□ 0.05
SPCS3-204ENST00000513139 FZD8Q9H461 694 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 SNTG2Q9NY99 539 aa15.36■□□□□ 0.05
SPCS3-204ENST00000513139 LRRIQ4A6NIV6 560 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 HRO43593 1189 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 B3GAT3O94766 335 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 ABLIM3O94929 683 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 CHRNB1P11230 501 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 XRCC6P12956 609 aaKnown RBP eCLIP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 RARRES1P49788 294 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 SATB1Q01826 763 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 DMWDQ09019 674 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 GRM2Q14416 872 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 CDCA2Q69YH5 1023 aaPredicted RBP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 SLC8B1Q6J4K2 584 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 CPLX2Q6PUV4 134 aaKnown RBP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 TCEAL8Q8IYN2 117 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 DEPDC1BQ8WUY9 529 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 ZNF274Q96GC6 653 aaPredicted RBP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 MSANTD3Q96H12 275 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 CCDC43Q96MW1 224 aaKnown RBP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 UROC1Q96N76 676 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 ADPGKQ9BRR6 497 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 POLR3FQ9H1D9 316 aaPredicted RBP15.35■□□□□ 0.05
SPCS3-204ENST00000513139 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 PIAS3Q9Y6X2 628 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 ASPMQ8IZT6 3477 aa15.35■□□□□ 0.05
SPCS3-204ENST00000513139 PRRG1O14668 218 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 ATF2P15336 505 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 PMLP29590 882 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 GDI1P31150 447 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 ELF1P32519 619 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 ROR1Q01973 937 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 IL31Q6EBC2 164 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 LONP2Q86WA8 852 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 ZBTB8OSQ8IWT0 167 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 SMARCD2Q92925 531 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 DDX27Q96GQ7 796 aaKnown RBP15.34■□□□□ 0.05
SPCS3-204ENST00000513139 CORO1BQ9BR76 489 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 C2orf40Q9H1Z8 148 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 TRPV4Q9HBA0 871 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 PCDHA12Q9UN75 941 aa15.34■□□□□ 0.05
SPCS3-204ENST00000513139 WDR27A2RRH5 827 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 GDF9O60383 454 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 SEC24BO95487 1268 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
SPCS3-204ENST00000513139 HOXA6P31267 233 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 PTGDRQ13258 359 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.04
SPCS3-204ENST00000513139 GAS6Q14393 721 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 UPP1Q16831 310 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 VITQ6UXI7 678 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 PDZD4Q76G19 769 aaPredicted RBP15.33■□□□□ 0.04
SPCS3-204ENST00000513139 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 TCEAL4Q96EI5 215 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 PPP1R10Q96QC0 940 aaKnown RBP15.33■□□□□ 0.04
SPCS3-204ENST00000513139 CXCL16Q9H2A7 254 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 KCNJ14Q9UNX9 436 aa15.33■□□□□ 0.04
SPCS3-204ENST00000513139 KIF26AQ9ULI4 1882 aaPredicted RBP15.33■□□□□ 0.04
SPCS3-204ENST00000513139 NUP210Q8TEM1 1887 aaPredicted RBP15.32■□□□□ 0.04
SPCS3-204ENST00000513139 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 CHURC1-FNTBB4DL54 471 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 K7ESF4 209 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 TM4SF5O14894 197 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 ZNF263O14978 683 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 XBP1P17861 261 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 FNTBP49356 437 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 CLCNKBP51801 687 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 TOB2Q14106 344 aaPredicted RBP15.32■□□□□ 0.04
SPCS3-204ENST00000513139 LRRC32Q14392 662 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 MAPK6Q16659 721 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 CYP4A22Q5TCH4 519 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 TPGS2Q68CL5 300 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 CD300LGQ6UXG3 332 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 PIK3AP1Q6ZUJ8 805 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 MFSD6LQ8IWD5 586 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 LEMD2Q8NC56 503 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 E2F7Q96AV8 911 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 MAFFQ9ULX9 164 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 EML5Q05BV3 1969 aa15.32■□□□□ 0.04
SPCS3-204ENST00000513139 ANKRD11Q6UB99 2663 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms