RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 ITGB1P05556 798 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 SBK3P0C264 359 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 SPATA31D3P0C874 917 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 LAG3P18627 525 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 MALP21145 153 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 PGS1Q32NB8 556 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 BEAN1Q3B7T3 259 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 THEMIS2Q5TEJ8 643 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 TSHZ3Q63HK5 1081 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 SPATA31D4Q6ZUB0 917 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 MRGPREQ86SM8 312 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 RAVER1Q8IY67 606 aaKnown RBP5.9□□□□□ -1.46
CHD1-210ENST00000513064 FITM2Q8N6M3 262 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 HPS3Q969F9 1004 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 MVB12AQ96EY5 273 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 VRK1Q99986 396 aaPredicted RBP5.9□□□□□ -1.46
CHD1-210ENST00000513064 REXO4Q9GZR2 422 aaKnown RBP5.9□□□□□ -1.46
CHD1-210ENST00000513064 NRDE2Q9H7Z3 1164 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 MMRN2Q9H8L6 949 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 ZIM2Q9NZV7 527 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 DKK2Q9UBU2 259 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 POLHQ9Y253 713 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 FPGT-TNNI3KV9GXZ4 949 aa5.9□□□□□ -1.46
CHD1-210ENST00000513064 TMEM200CA6NKL6 621 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 NT5C1B-RDH14C9J2C7 533 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 SLC43A1O75387 559 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 HAUS5O94927 633 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 CD1AP06126 327 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 CKBP12277 381 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 MAKP20794 623 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 CYP2C19P33261 490 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 MCM7P33993 719 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 BMPR1AP36894 532 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 HK3P52790 923 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 SNAPC2Q13487 334 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 NFE2Q16621 373 aaPredicted RBP5.89□□□□□ -1.47
CHD1-210ENST00000513064 C3orf20Q8ND61 904 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 SIDT1Q9NXL6 827 aaKnown RBP5.89□□□□□ -1.47
CHD1-210ENST00000513064 REXO2Q9Y3B8 237 aaKnown RBP5.89□□□□□ -1.47
CHD1-210ENST00000513064 HS3ST4Q9Y661 456 aa5.89□□□□□ -1.47
CHD1-210ENST00000513064 A0A1B0GTW7 788 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 CDHR4A6H8M9 788 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 LRRC14BA6NHZ5 514 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 NDUFA10O95299 355 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 ARIH2O95376 493 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 CFIP05156 583 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 HLA-DOAP06340 250 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 ABHD18Q0P651 414 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 GTF2H3Q13889 308 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 FLYWCH1Q4VC44 716 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 LRRC55Q6ZSA7 311 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 USP51Q70EK9 711 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 MAPKAPK5Q8IW41 473 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 TPH2Q8IWU9 490 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 SYNE4Q8N205 404 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 RGMAQ96B86 450 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 CLIP3Q96DZ5 547 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 MAP3K14Q99558 947 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 RNPEPQ9H4A4 650 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 JKAMPQ9P055 326 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 HS3ST3A1Q9Y663 406 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 EID1Q9Y6B2 187 aa5.88□□□□□ -1.47
CHD1-210ENST00000513064 F2RL2O00254 374 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 OFD1O75665 1012 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 FSHBP01225 129 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 ELANEP08246 267 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 FTH1P19P0C7X4 201 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 SMARCA1P28370 1054 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 GDF5P43026 501 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 MAP2K6P52564 334 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 NOMO3P69849 1222 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 NOGQ13253 232 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 TIGD2Q4W5G0 525 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 IFIT1BQ5T764 474 aaKnown RBP5.87□□□□□ -1.47
CHD1-210ENST00000513064 ARMC6Q6NXE6 501 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 SLC4A10Q6U841 1118 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 TMEM132CQ8N3T6 1108 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 TBC1D15Q8TC07 691 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 C1GALT1C1Q96EU7 318 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 PACSIN1Q9BY11 444 aa5.87□□□□□ -1.47
CHD1-210ENST00000513064 CENPVL1A0A0U1RR11 272 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 CYR61O00622 381 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 AP1G1O43747 822 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 FTLP02792 175 aaPredicted RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 LPOP22079 712 aaPredicted RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 FGFR4P22455 802 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 DDX6P26196 483 aaKnown RBP eCLIP5.86□□□□□ -1.47
CHD1-210ENST00000513064 OCA2Q04671 838 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 UTP14CQ5TAP6 766 aaKnown RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 B3GNTL1Q67FW5 361 aaPredicted RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 EPM2AIP1Q7L775 607 aaPredicted RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 ULK2Q8IYT8 1036 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 SLC16A11Q8NCK7 471 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 JDP2Q8WYK2 163 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms