RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 GCKP35557 465 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PPM1AP35813 382 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 NAMPTP43490 491 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 INPP1P49441 399 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 DPYDQ12882 1025 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PEX6Q13608 980 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MFSD10Q14728 455 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 LBRQ14739 615 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 UGP2Q16851 508 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PABPC1LQ4VXU2 614 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 SMIM5Q71RC9 77 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ADCK2Q7Z695 626 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 CALML6Q8TD86 181 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 VPS50Q96JG6 964 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MCCC1Q96RQ3 725 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 SERPINI1Q99574 410 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 GPRC5DQ9NZD1 345 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 HSPBP1Q9NZL4 362 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 STX18Q9P2W9 335 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 RWDD3Q9Y3V2 267 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SETBP1Q9Y6X0 1596 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 EMSYQ7Z589 1322 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 FOXP2O15409 715 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SRGAP2O75044 1071 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 NDUFS3O75489 264 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SEC24BO95487 1268 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MYL4P12829 197 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 TRADDQ15628 312 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ANGPTL8Q6UXH0 198 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 RRM2BQ7LG56 351 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SPATS2Q86XZ4 545 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 UNC45BQ8IWX7 931 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 LRRC71Q8N4P6 559 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SLAIN1Q8ND83 568 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SLC26A7Q8TE54 656 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 SENP1Q9P0U3 644 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 POLLQ9UGP5 575 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PCDHB5Q9Y5E4 795 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 CROCC2H7BZ55 1655 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MYMKA6NI61 221 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ZC3H11AO75152 810 aaKnown RBP eCLIP4.48□□□□□ -1.69
VCAN-209ENST00000513016 TOM1L1O75674 476 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 FBXO21O94952 628 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ASS1P00966 412 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 APOA4P06727 396 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 IL1R1P14778 569 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 STMN1P16949 149 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 EIF3BP55884 814 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 ZNF284Q2VY69 593 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 CCDC157Q569K6 752 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PASD1Q8IV76 773 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 EXT2Q93063 718 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MRIQ9BWK5 157 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ASPSCR1Q9BZE9 553 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 GPR63Q9BZJ6 419 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ECT2Q9H8V3 914 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PKP3Q9Y446 797 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 NEXMIFQ5QGS0 1516 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 TXNDC9O14530 226 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 HSPA4LO95757 839 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 OCM2P0CE71 109 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 OCMP0CE72 109 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 PYGBP11216 843 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 CKBP12277 381 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 KLRC1P26715 233 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ART3Q13508 389 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 FSCN1Q16658 493 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 P3H1Q32P28 736 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 DCAF6Q58WW2 860 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ANKRD40Q6AI12 368 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 UGT3A1Q6NUS8 523 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ZNF677Q86XU0 584 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 RNF10Q8N5U6 811 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 ZNF564Q8TBZ8 553 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 RSRC1Q96IZ7 334 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 NHEJ1Q9H9Q4 299 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 CASS4Q9NQ75 786 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 DPP3Q9NY33 737 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PSD3Q9NYI0 1048 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ADM5C9JUS6 153 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 H3BRB1 525 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 EEF2KO00418 725 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 PDGFRBP09619 1106 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 HIRAP54198 1017 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 CDH6P55285 790 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ERVK-9P63128 1117 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ERVK-24P63145 666 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ATP2C1P98194 919 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 DRAP1Q14919 205 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 LMBRD2Q68DH5 695 aaPredicted RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 CYP4F22Q6NT55 531 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MPZL3Q6UWV2 235 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 ADAMTS13Q76LX8 1427 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 HPDLQ96IR7 371 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 PANX2Q96RD6 677 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 MKNK1Q9BUB5 465 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 UBXN6Q9BZV1 441 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 TUT1Q9H6E5 874 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 JMJD4Q9H9V9 463 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms