RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 NAP1L4Q99733 375 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 TCF25Q9BQ70 676 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 INO80BQ9C086 356 aaPredicted RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 OSBPL2Q9H1P3 480 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 CYP26B1Q9NR63 512 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 CHST12Q9NRB3 414 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 FSD2A1L4K1 749 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 TBX3O15119 743 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 SOX18P35713 384 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 KRT2P35908 639 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 KRT17Q04695 432 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 HYAL2Q12891 473 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 EPHA7Q15375 998 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 SV2BQ7L1I2 683 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 SLC7A3Q8WY07 619 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 LXNQ9BS40 222 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 MRPL9Q9BYD2 267 aaKnown RBP10.52□□□□□ -0.73
TRIO-220ENST00000512979 NUCKS1Q9H1E3 243 aaKnown RBP10.52□□□□□ -0.73
TRIO-220ENST00000512979 BRMS1Q9HCU9 246 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 NGRNQ9NPE2 291 aaKnown RBP10.52□□□□□ -0.73
TRIO-220ENST00000512979 SPG21Q9NZD8 308 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 WRAP73Q9P2S5 460 aaPredicted RBP10.52□□□□□ -0.73
TRIO-220ENST00000512979 MUTYHQ9UIF7 546 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 HCN2Q9UL51 889 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 USP15Q9Y4E8 981 aaPredicted RBP10.52□□□□□ -0.73
TRIO-220ENST00000512979 PLXNA4Q9HCM2 1894 aa10.52□□□□□ -0.73
TRIO-220ENST00000512979 HIDE1A8MVS5 230 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 MAN1A2O60476 641 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 BAG4O95429 457 aaKnown RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 LARGE1O95461 756 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 SSBP05455 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRIO-220ENST00000512979 SRGAP2BP0DMP2 458 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 FDPSP14324 419 aaKnown RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 YWHABP31946 246 aaKnown RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 GRIA4P48058 902 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 SMCPP49901 116 aaPredicted RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 POLGP54098 1239 aaPredicted RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 PLAURQ03405 335 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 SPEM2Q0P670 501 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 ME3Q16798 604 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 LLGL2Q6P1M3 1020 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 RAB44Q7Z6P3 723 aaPredicted RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 C4orf19Q8IY42 314 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 SLFN12Q8IYM2 578 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 SLC39A11Q8N1S5 342 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 PSPC1Q8WXF1 523 aaKnown RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 LPPQ93052 612 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 TMEM143Q96AN5 459 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 DYDC2Q96IM9 177 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 NSUN5Q96P11 429 aaKnown RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 DHX33Q9H6R0 707 aaKnown RBP10.51□□□□□ -0.73
TRIO-220ENST00000512979 FAM105AQ9NUU6 356 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 RGL1Q9NZL6 768 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 MARK1Q9P0L2 795 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 TLR6Q9Y2C9 796 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 EFR3BQ9Y2G0 817 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 COL4A3BPQ9Y5P4 624 aa10.51□□□□□ -0.73
TRIO-220ENST00000512979 TLDC2A0PJX2 215 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 METTL12A8MUP2 240 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 NT5C1B-RDH14C9J2C7 533 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIO-220ENST00000512979 CELA3AP09093 270 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 SRGAP2CP0DJJ0 459 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 CA8P35219 290 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 TECP42680 631 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 ALDH7A1P49419 539 aaKnown RBP10.5□□□□□ -0.73
TRIO-220ENST00000512979 RAB27AP51159 221 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 BCAR1P56945 870 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 CYP4A11Q02928 519 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 CTTNQ14247 550 aaKnown RBP10.5□□□□□ -0.73
TRIO-220ENST00000512979 SMC1AQ14683 1233 aaKnown RBP10.5□□□□□ -0.73
TRIO-220ENST00000512979 ANKRD54Q6NXT1 300 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 FBXL19Q6PCT2 694 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 GLB1LQ6UWU2 654 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 PHC3Q8NDX5 983 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 NSUN7Q8NE18 718 aaKnown RBP10.5□□□□□ -0.73
TRIO-220ENST00000512979 PRPF31Q8WWY3 499 aaKnown RBP10.5□□□□□ -0.73
TRIO-220ENST00000512979 TNFRSF25Q93038 417 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 BHMTQ93088 406 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 TMEM169Q96HH4 297 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 RHOVQ96L33 236 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 SLC30A3Q99726 388 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 PHF7Q9BWX1 381 aaPredicted RBP10.5□□□□□ -0.73
TRIO-220ENST00000512979 IFT122Q9HBG6 1241 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 AGPAT5Q9NUQ2 364 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 DZANK1Q9NVP4 752 aa10.5□□□□□ -0.73
TRIO-220ENST00000512979 C2orf71A6NGG8 1288 aa10.49□□□□□ -0.73
TRIO-220ENST00000512979 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms