RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OPHN1O60890 802 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 PEX11BO96011 259 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 CLEC2LP0C7M8 214 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 ENPP1P22413 925 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 HMGB2P26583 209 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 GPR3P46089 330 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 ANTXR2P58335 489 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 KLF1Q13351 362 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 DGKDQ16760 1214 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 SYDE2Q5VT97 1194 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 BMP8AQ7Z5Y6 402 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 LYSMD2Q8IV50 215 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 GPR135Q8IZ08 494 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 ANKRD35Q8N283 1001 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 CBARPQ8N350 705 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 OR14K1Q8NGZ2 314 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 ZNF483Q8TF39 744 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 RABGGTAQ92696 567 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 FERMT2Q96AC1 680 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 CAPNS2Q96L46 248 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 ASPSCR1Q9BZE9 553 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 HAPLN2Q9GZV7 340 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 CCDC8Q9H0W5 538 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 TRHDEQ9UKU6 1024 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 NUMBLQ9Y6R0 609 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 PLEKHH1Q9ULM0 1364 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 COL6A3P12111 3177 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 KDM6AO15550 1401 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 KIAA1551Q9HCM1 1747 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 ST20-MTHFSA0A0A6YYL1 179 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 A0A0G2JLW4 131 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 GABRDO14764 452 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 H2AFYO75367 372 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 PDGFRBP09619 1106 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 DGCR2P98153 550 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 GRM1Q13255 1194 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 CRHR2Q13324 411 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 CT83Q5H943 113 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 PITRM1Q5JRX3 1037 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 KLHDC10Q6PID8 442 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 TMPRSS6Q8IU80 811 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 OR5AN1Q8NGI8 311 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 NEU4Q8WWR8 484 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 GFM2Q969S9 779 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 MTMR8Q96EF0 704 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 USP54Q70EL1 1684 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 ARFGEF1Q9Y6D6 1849 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 ITSN1Q15811 1721 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 NSD3Q9BZ95 1437 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 WASHC2AQ641Q2 1341 aa4.72□□□□□ -1.65
TOPBP1-208ENST00000511439 EIF3AQ14152 1382 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 ABCC11Q96J66 1382 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 A0A087X1B8 175 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 A0A1W2PRX2 142 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 TRIM75PA6NK02 468 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDH8O95206 1070 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 MAP2K2P36507 400 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 STAT5BP51692 787 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 RIN1Q13671 783 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 TRIM25Q14258 630 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 UGT8Q16880 541 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 CCDC62Q6P9F0 684 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 TGFBRAP1Q8WUH2 860 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 RSAD2Q8WXG1 361 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 EAF2Q96CJ1 260 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 PRRX2Q99811 253 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 NOL10Q9BSC4 688 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 SLC6A15Q9H2J7 730 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 IKZF4Q9H2S9 585 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 PRDM12Q9H4Q4 367 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 STK26Q9P289 416 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 SAE1Q9UBE0 346 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 PRSS50Q9UI38 385 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 CCNL1Q9UK58 526 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 CTDP1Q9Y5B0 961 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHB6Q9Y5E3 794 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 KIF13BQ9NQT8 1826 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 TIAM2Q8IVF5 1701 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 DAPK1P53355 1430 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 WDR17Q8IZU2 1322 aa4.71□□□□□ -1.66
TOPBP1-208ENST00000511439 N4BP2Q86UW6 1770 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 A0A0A6YYK5 440 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 LPLP06858 475 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 HSP90B1P14625 803 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 DPEP1P16444 411 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 IARSP41252 1262 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 GPR15P49685 360 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.7□□□□□ -1.668e-6■■■■■ 36.9
TOPBP1-208ENST00000511439 CCDC178Q5BJE1 867 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 KCNK18Q7Z418 384 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 CDYL2Q8N8U2 506 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 NGDNQ8NEJ9 315 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 C1orf162Q8NEQ5 155 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 PPP1R14CQ8TAE6 165 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 SLC7A6OSQ96CW6 309 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 DYDC2Q96IM9 177 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms