RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 HSP90B1P14625 803 aaKnown RBP8.83□□□□□ -1
TRAPPC11-206ENST00000509857 EPHB1P54762 984 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 RRP1BQ14684 758 aaKnown RBP8.83□□□□□ -1
TRAPPC11-206ENST00000509857 CSRP2Q16527 193 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 BMT2Q1RMZ1 405 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 ANKS6Q68DC2 871 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 DRICH1Q6PGQ1 229 aaPredicted RBP8.83□□□□□ -1
TRAPPC11-206ENST00000509857 AFAP1Q8N556 730 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 GPR20Q99678 358 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 SENP6Q9GZR1 1112 aaPredicted RBP8.83□□□□□ -1
TRAPPC11-206ENST00000509857 ZNF703Q9H7S9 590 aaPredicted RBP8.83□□□□□ -1
TRAPPC11-206ENST00000509857 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 MROH1Q8NDA8 1641 aa8.83□□□□□ -1
TRAPPC11-206ENST00000509857 EFCAB6Q5THR3 1501 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 E2F8A0AVK6 867 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 CCDC154A6NI56 674 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 TBKBP1A7MCY6 615 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 CXorf49A8MYA2 514 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-206ENST00000509857 PLSCR1O15162 318 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 SGTAO43765 313 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 AMY1AP04745 511 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 ATP8B2P98198 1209 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 MTM1Q13496 603 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 PIN1Q13526 163 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-206ENST00000509857 VPS72Q15906 364 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 RNF207Q6ZRF8 634 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 XYLT1Q86Y38 959 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 TMPRSS6Q8IU80 811 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 IL17DQ8TAD2 202 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 CAMKK2Q96RR4 588 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 NUP88Q99567 741 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-206ENST00000509857 MNTQ99583 582 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 CSRNP2Q9H175 543 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 PRKRIP1Q9H875 184 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-206ENST00000509857 AASDHPPTQ9NRN7 309 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 TMEM140Q9NV12 185 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 MOCS1Q9NZB8 636 aa8.82□□□□□ -1
TRAPPC11-206ENST00000509857 AJAP1Q9UKB5 411 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-206ENST00000509857 THRAP3Q9Y2W1 955 aaKnown RBP8.82□□□□□ -1
TRAPPC11-206ENST00000509857 PRR5-ARHGAP8B1AHC4 643 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 GPR32O75388 356 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 PTH1RQ03431 593 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 CRHR2Q13324 411 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 C3orf36Q3SXR2 165 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 USP39Q53GS9 565 aaKnown RBP8.81□□□□□ -1
TRAPPC11-206ENST00000509857 ODR4Q5SWX8 454 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 FBXO18Q8NFZ0 1043 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 LDAHQ9H6V9 325 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 MYRFQ9Y2G1 1151 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 MYOM2P54296 1465 aa8.81□□□□□ -1
TRAPPC11-206ENST00000509857 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 GRXCR1A8MXD5 290 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 TEX33O43247 280 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 SNRPA1P09661 255 aaKnown RBP8.8□□□□□ -1
TRAPPC11-206ENST00000509857 HK1P19367 917 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 FPR1P21462 350 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 PCSK1P29120 753 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 CDC42EP1Q00587 391 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 CNGB1Q14028 1251 aaPredicted RBP8.8□□□□□ -1
TRAPPC11-206ENST00000509857 AFMIDQ63HM1 303 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 RHOT1Q8IXI2 618 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 MIER2Q8N344 545 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 ZGPATQ8N5A5 531 aaKnown RBP8.8□□□□□ -1
TRAPPC11-206ENST00000509857 SLC35B2Q8TB61 432 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 EXTL1Q92935 676 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 HSPBAP1Q96EW2 488 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 CEP72Q9P209 647 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.8□□□□□ -1
TRAPPC11-206ENST00000509857 XDHP47989 1333 aa8.8□□□□□ -1
TRAPPC11-206ENST00000509857 AKAP10O43572 662 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 VCAM1P19320 739 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 ALDH1A3P47895 512 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 CLRN1P58418 232 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 TARDBPQ13148 414 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC11-206ENST00000509857 UAP1L1Q3KQV9 507 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 RRP12Q5JTH9 1297 aaKnown RBP8.79□□□□□ -1
TRAPPC11-206ENST00000509857 CCHCR1Q8TD31 782 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 SH3RF3Q8TEJ3 882 aaPredicted RBP8.79□□□□□ -1
TRAPPC11-206ENST00000509857 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 FAM30AQ9NZY2 134 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 ANKRD6Q9Y2G4 727 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 CFAP20Q9Y6A4 193 aaKnown RBP8.79□□□□□ -1
TRAPPC11-206ENST00000509857 ARHGAP31Q2M1Z3 1444 aa8.79□□□□□ -1
TRAPPC11-206ENST00000509857 MYBBP1AQ9BQG0 1328 aaKnown RBP8.79□□□□□ -1
TRAPPC11-206ENST00000509857 ZC3H13Q5T200 1668 aaKnown RBP8.78□□□□□ -1
TRAPPC11-206ENST00000509857 INSRP06213 1382 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 RAB27AP51159 221 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 TOB2Q14106 344 aaPredicted RBP8.78□□□□□ -1
TRAPPC11-206ENST00000509857 SEM1Q6ZVN7 128 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 C1orf210Q8IVY1 113 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 ZFP28Q8NHY6 868 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 STON2Q8WXE9 905 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 TFAP2CQ92754 450 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 RTFDC1Q9BY42 306 aaPredicted RBP8.78□□□□□ -1
TRAPPC11-206ENST00000509857 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 CDH19Q9H159 772 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 TDP1Q9NUW8 608 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 IP6K2Q9UHH9 426 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 PCDHA13Q9Y5I0 950 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms