RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CUEDC2Q9H467 287 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 MTRRQ9UBK8 725 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
UBE3D-207ENST00000509102 A0A0B4J269 797 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 MYMKA6NI61 221 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 H7C4K7 107 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 RFPL2O75678 378 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 ZMYND10O75800 440 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 TKTP29401 623 aaKnown RBP20.3■□□□□ 0.84
UBE3D-207ENST00000509102 OR1D2P34982 312 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 BRCC3P46736 316 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 AMPD3Q01432 767 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 ALCAMQ13740 583 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 POSTNQ15063 836 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 ZC2HC1CQ53FD0 456 aaPredicted RBP20.3■□□□□ 0.84
UBE3D-207ENST00000509102 ADALQ6DHV7 355 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 TRIM67Q6ZTA4 783 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 ZNF720Q7Z2F6 126 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 SPRYD3Q8NCJ5 442 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 C3orf58Q8NDZ4 430 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 APPL2Q8NEU8 664 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 FAM212AQ96EL1 285 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 MFSD14AQ96MC6 490 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 FIZ1Q96SL8 496 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 PRKD2Q9BZL6 878 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 FBXW11Q9UKB1 542 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 SORCS3Q9UPU3 1222 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 PCDHB13Q9Y5F0 798 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 BACE2Q9Y5Z0 518 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 TRIP11Q15643 1979 aa20.3■□□□□ 0.84
UBE3D-207ENST00000509102 PLXNA3P51805 1871 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 TTC26A0AVF1 554 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 I3L4J1 428 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 XYLBO75191 536 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 GCNT3O95395 438 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 HNRNPA1P09651 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBE3D-207ENST00000509102 CYP3A5P20815 502 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 SIGLEC14Q08ET2 396 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 RAB33AQ14088 237 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 FOXD4L6Q3SYB3 417 aaPredicted RBP20.29■□□□□ 0.84
UBE3D-207ENST00000509102 PPM1LQ5SGD2 360 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 FOXD4L3Q6VB84 417 aaPredicted RBP20.29■□□□□ 0.84
UBE3D-207ENST00000509102 STXBP4Q6ZWJ1 553 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 CCDC65Q8IXS2 484 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 UBALD2Q8IYN6 164 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 IQUBQ8NA54 791 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 ACCSQ96QU6 501 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 HAPLN2Q9GZV7 340 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 TNMDQ9H2S6 317 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 WDR6Q9NNW5 1121 aaKnown RBP20.29■□□□□ 0.84
UBE3D-207ENST00000509102 OLFML3Q9NRN5 406 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 CDY1Q9Y6F8 540 aa20.29■□□□□ 0.84
UBE3D-207ENST00000509102 CLUHO75153 1309 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 MYH15Q9Y2K3 1946 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 TMEM221A6NGB7 291 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 M0R296 226 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 C8AP07357 584 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 GBP2P32456 591 aaPredicted RBP20.28■□□□□ 0.84
UBE3D-207ENST00000509102 TNFSF9P41273 254 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 ME1P48163 572 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 RTL10Q7L3V2 364 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 SYCP3Q8IZU3 236 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 BEST2Q8NFU1 509 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 POMGNT1Q8WZA1 660 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 DNAJC19Q96DA6 116 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 PANK4Q9NVE7 773 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 TUBGCP4Q9UGJ1 667 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 LIMD1Q9UGP4 676 aa20.28■□□□□ 0.84
UBE3D-207ENST00000509102 AGO2Q9UKV8 859 aaKnown RBP20.28■□□□□ 0.84
UBE3D-207ENST00000509102 LACTBL1A8MY62 500 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 HOXA9P31269 272 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 ELF1P32519 619 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 SPAG1Q07617 926 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 ENOX2Q16206 610 aaKnown RBP20.27■□□□□ 0.84
UBE3D-207ENST00000509102 UVSSAQ2YD98 709 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 VARS2Q5ST30 1063 aaKnown RBP20.27■□□□□ 0.84
UBE3D-207ENST00000509102 L1TD1Q5T7N2 865 aaKnown RBP20.27■□□□□ 0.84
UBE3D-207ENST00000509102 CD300LGQ6UXG3 332 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 SUGP1Q8IWZ8 645 aaKnown RBP20.27■□□□□ 0.84
UBE3D-207ENST00000509102 SUSD3Q96L08 255 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 PYM1Q9BRP8 204 aaKnown RBP20.27■□□□□ 0.84
UBE3D-207ENST00000509102 TBC1D7Q9P0N9 293 aa20.27■□□□□ 0.84
UBE3D-207ENST00000509102 CPSF3Q9UKF6 684 aaKnown RBP20.27■□□□□ 0.84
UBE3D-207ENST00000509102 A0A087X0B3 334 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 MEFVO15553 781 aaPredicted RBP20.26■□□□□ 0.83
UBE3D-207ENST00000509102 PAX3P23760 479 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 LRPAP1P30533 357 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 POU5F1Q01860 360 aaKnown RBP20.26■□□□□ 0.83
UBE3D-207ENST00000509102 TMEM132DQ14C87 1099 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 AXDND1Q5T1B0 1012 aaPredicted RBP20.26■□□□□ 0.83
UBE3D-207ENST00000509102 ZNF280DQ6N043 979 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 SLC39A4Q6P5W5 647 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 HFE2Q6ZVN8 426 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 SLC7A14Q8TBB6 771 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 PBXIP1Q96AQ6 731 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 DHX58Q96C10 678 aa20.26■□□□□ 0.83
UBE3D-207ENST00000509102 ZNF707Q96C28 371 aaPredicted RBP20.26■□□□□ 0.83
UBE3D-207ENST00000509102 ASB7Q9H672 318 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms