RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TLR5O60602 858 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 VCPP55072 806 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 OLFML1Q6UWY5 402 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 HDXQ7Z353 690 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NUDCD3Q8IVD9 361 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ARID3BQ8IVW6 561 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 REXO1Q8N1G1 1221 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 POMGNT2Q8NAT1 580 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 BRSK1Q8TDC3 778 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 MAML3Q96JK9 1138 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TSNARE1Q96NA8 513 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ADI1Q9BV57 179 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 PNO1Q9NRX1 252 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ANO10Q9NW15 660 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 WASF2Q9Y6W5 498 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TIAM2Q8IVF5 1701 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CIAO1O76071 339 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 EPN2O95208 641 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 PRIM2P49643 509 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SERINC3Q13530 473 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RABL6Q3YEC7 729 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ARMC4Q5T2S8 1044 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CASC4Q6P4E1 433 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CACNA2D4Q7Z3S7 1137 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NANOGNBQ7Z5D8 188 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KRT77Q7Z794 578 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 FAM76AQ8TAV0 307 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KLHDC4Q8TBB5 520 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CAGE1Q8TC20 777 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KIAA1191Q96A73 305 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 HSH2DQ96JZ2 352 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ATP6V1G3Q96LB4 118 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 MTRQ99707 1265 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TSC22D4Q9Y3Q8 395 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RTL9Q8NET4 1388 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 LAMB1P07942 1786 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 BCL9LQ86UU0 1499 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 CARMIL3Q8ND23 1372 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 CCDC196A0A1B0GTZ2 297 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 A0A1B0GUA9 196 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 EREGO14944 169 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SERPINI2O75830 405 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 KCNJ4P48050 445 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PPP2R2AP63151 447 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 CREMQ03060 361 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SMU1Q2TAY7 513 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ERFEQ4G0M1 354 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 FNDC3BQ53EP0 1204 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ANKS6Q68DC2 871 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 RHPN2Q8IUC4 686 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 UNC5CLQ8IV45 518 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 LEMD2Q8NC56 503 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PPP1R35Q8TAP8 253 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 TRAPPC12Q8WVT3 735 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 OSMRQ99650 979 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 MEIS3Q99687 375 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 C7orf25Q9BPX7 421 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SLC39A3Q9BRY0 314 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 MIS18AQ9NYP9 233 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 RAD50Q92878 1312 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PROM1O43490 865 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 AHCYL1O43865 530 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SNX4O95219 450 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ITGA2BP08514 1039 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SERPINB3P29508 390 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 GABREP78334 506 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 AMPD2Q01433 879 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 DSC3Q14574 896 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ATP2B3Q16720 1220 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SLC10A6Q3KNW5 377 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 XKR9Q5GH70 373 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 RIPOR1Q6ZS17 1223 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 MIGA2Q7L4E1 593 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 BEND5Q7L4P6 421 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SRGAP1Q7Z6B7 1085 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 BAP1Q92560 729 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SLC5A5Q92911 643 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 FAXDC2Q96IV6 333 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 JMJD4Q9H9V9 463 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 RPRD1BQ9NQG5 326 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 RIC8BQ9NVN3 520 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 NEURL1BA8MQ27 555 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 FAM155AB1AL88 458 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 GRM8O00222 908 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 DGKGP49619 791 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 GSTM4Q03013 218 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 TRIM28Q13263 835 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 KLF1Q13351 362 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 KRT24Q2M2I5 525 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ARL13BQ3SXY8 428 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 IZUMO3Q5VZ72 239 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 CYP4F22Q6NT55 531 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 IKBIPQ70UQ0 350 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 REC114Q7Z4M0 266 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ANKS4BQ8N8V4 417 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 KCT2Q8NC54 265 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ANKK1Q8NFD2 765 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 DDI1Q8WTU0 396 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 FAM216AQ8WUB2 273 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ANKRD49Q8WVL7 239 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms