RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
TRIO-212ENST00000508717 FANCLQ9NW38 375 aa14.24□□□□□ -0.13
TRIO-212ENST00000508717 YBX2Q9Y2T7 364 aaKnown RBP14.24□□□□□ -0.13
TRIO-212ENST00000508717 COQ4Q9Y3A0 265 aa14.24□□□□□ -0.13
TRIO-212ENST00000508717 CHD9Q3L8U1 2897 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 P4HA2O15460 535 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 STAU1O95793 577 aaKnown RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 RB1P06400 928 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 DLATP10515 647 aaKnown RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 TNNI1P19237 187 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 IBSPP21815 317 aaPredicted RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 ALDH7A1P49419 539 aaKnown RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 ERVK-21P61565 698 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 DLG4P78352 724 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 TAP1Q03518 808 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 RNASELQ05823 741 aaKnown RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 PAN2Q504Q3 1202 aaKnown RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 TCP11X2Q5H9J9 407 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 DCLRE1AQ6PJP8 1040 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 KCNT2Q6UVM3 1135 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 AOPEPQ8N6M6 819 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 C1orf127Q8N9H9 656 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 OR5B17Q8NGF7 314 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 C18orf25Q96B23 403 aaPredicted RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
TRIO-212ENST00000508717 TMEM8AQ9HCN3 771 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 DPP3Q9NY33 737 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 DNAJB4Q9UDY4 337 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 TUBGCP4Q9UGJ1 667 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 ITGA11Q9UKX5 1188 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 TRIOBPQ9H2D6 2365 aa14.23□□□□□ -0.13
TRIO-212ENST00000508717 BECN2A8MW95 431 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 NRP1O14786 923 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 TNNC2P02585 160 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 CA3P07451 260 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 TMEM191BP0C7N4 346 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 PPM1AP35813 382 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 BMPR1AP36894 532 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 PBX2P40425 430 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 AARSP49588 968 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRIO-212ENST00000508717 BCAR1P56945 870 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 TFAMQ00059 246 aaKnown RBP14.22□□□□□ -0.13
TRIO-212ENST00000508717 PLCB3Q01970 1234 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 PPP3CAQ08209 521 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 KRT39Q6A163 491 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 SV2AQ7L0J3 742 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 TRAPPC11Q7Z392 1133 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 SLC39A11Q8N1S5 342 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 LRRC52Q8N7C0 313 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 COLGALT1Q8NBJ5 622 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 ZNF558Q96NG5 402 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 VRTNQ9H8Y1 702 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 STK39Q9UEW8 545 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 LIMA1Q9UHB6 759 aaKnown RBP14.22□□□□□ -0.13
TRIO-212ENST00000508717 SIX4Q9UIU6 781 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 FAN1Q9Y2M0 1017 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRIO-212ENST00000508717 CHD7Q9P2D1 2997 aa14.22□□□□□ -0.13
TRIO-212ENST00000508717 KCNJ18B7U540 433 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 N4BP1O75113 896 aaKnown RBP14.21□□□□□ -0.13
TRIO-212ENST00000508717 ZC3H11AO75152 810 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRIO-212ENST00000508717 ARHGEF15O94989 841 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 MYOGP15173 224 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 DNAJB2P25686 324 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 PNPLA4P41247 253 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 SLC11A1P49279 550 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 CLCNKBP51801 687 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 RBP5P82980 135 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 KCNJ12Q14500 433 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 MAN2A1Q16706 1144 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 C9orf57Q5W0N0 161 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 CD300LGQ6UXG3 332 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 APTXQ7Z2E3 356 aaKnown RBP14.21□□□□□ -0.13
TRIO-212ENST00000508717 GPR65Q8IYL9 337 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 RNF168Q8IYW5 571 aaPredicted RBP14.21□□□□□ -0.13
TRIO-212ENST00000508717 IGSF21Q96ID5 467 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 FAXDC2Q96IV6 333 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 TGS1Q96RS0 853 aaKnown RBP14.21□□□□□ -0.13
TRIO-212ENST00000508717 PAAF1Q9BRP4 392 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 COLEC11Q9BWP8 271 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 MTMR12Q9C0I1 747 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 GOLGA2P5Q9HBQ8 144 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 MARCH5Q9NX47 278 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 MAGEC2Q9UBF1 373 aaPredicted RBP14.21□□□□□ -0.13
TRIO-212ENST00000508717 HCSTQ9UBK5 93 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 PCDHB12Q9Y5F1 795 aa14.21□□□□□ -0.13
TRIO-212ENST00000508717 GBF1Q92538 1859 aa14.21□□□□□ -0.14
TRIO-212ENST00000508717 GTPBP10A4D1E9 387 aaKnown RBP14.2□□□□□ -0.14
TRIO-212ENST00000508717 CASTOR2A6NHX0 329 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 PODXLO00592 558 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 AFPP02771 609 aaKnown RBP14.2□□□□□ -0.14
TRIO-212ENST00000508717 TRIM49P0CI25 452 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 TRIM49CP0CI26 452 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 ATICP31939 592 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 FMO5P49326 533 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
TRIO-212ENST00000508717 MIIPQ5JXC2 388 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms