RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 EPC2Q52LR7 807 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 WDR49Q8IV35 697 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 FAM186BQ8IYM0 893 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 CSGALNACT2Q8N6G5 542 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 C1orf127Q8N9H9 656 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 KIF12Q96FN5 646 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 DACH1Q9UI36 760 aa16.21■□□□□ 0.19
CALCOCO2-211ENST00000508679 CASTOR2A6NHX0 329 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 NT5C1B-RDH14C9J2C7 533 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 RB1P06400 928 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 FXR1P51114 621 aaKnown RBP eCLIP16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 PLCB3Q01970 1234 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 PPP3CAQ08209 521 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 BFSP1Q12934 665 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 TMEM132DQ14C87 1099 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 ANO6Q4KMQ2 910 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 CDKAL1Q5VV42 579 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 LMBRD2Q68DH5 695 aaPredicted RBP16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 TRIM59Q8IWR1 403 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 RABGGTAQ92696 567 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 FAM212AQ96EL1 285 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 IGSF21Q96ID5 467 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 SAMD11Q96NU1 681 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 PLVAPQ9BX97 442 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 SLC38A7Q9NVC3 462 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
CALCOCO2-211ENST00000508679 MYO7AQ13402 2215 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 IKBKBO14920 756 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 ZC3H11AO75152 810 aaKnown RBP eCLIP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 KIF4AO95239 1232 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 ALDH2P05091 517 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 CCDC192P0DO97 292 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 DNAJB1P25685 340 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 RPL9P32969 192 aaKnown RBP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 AARSP49588 968 aaKnown RBP eCLIP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 VAMP7P51809 220 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 RNASELQ05823 741 aaKnown RBP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 C9orf57Q5W0N0 161 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 PPP2R2DQ66LE6 453 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 INTS8Q75QN2 995 aaKnown RBP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 DHX40Q8IX18 779 aaKnown RBP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 KLHL23Q8NBE8 558 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 SPPL3Q8TCT6 385 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 SLC35C1Q96A29 364 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 CCDC127Q96BQ5 260 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 UROC1Q96N76 676 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 ZNF558Q96NG5 402 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 ZNF576Q9H609 170 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 SLC28A3Q9HAS3 691 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 SAMSN1Q9NSI8 373 aaKnown RBP16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 RWDD3Q9Y3V2 267 aa16.19■□□□□ 0.18
CALCOCO2-211ENST00000508679 H3BNC9 293 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 SPTLC1O15269 473 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 VNN1O95497 513 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 CST3P01034 146 aaPredicted RBP16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 ZNF18P17022 549 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 ZNF445P59923 1031 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 HSP90AA2PQ14568 343 aaPredicted RBP16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 ZACNQ401N2 412 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 DCLRE1AQ6PJP8 1040 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 TRAPPC11Q7Z392 1133 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 MTMR12Q9C0I1 747 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 THAP9Q9H5L6 903 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 DPP3Q9NY33 737 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.18■□□□□ 0.18
CALCOCO2-211ENST00000508679 PODXLO00592 558 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 FGF18O76093 207 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 TRIM49P0CI25 452 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 TRIM49CP0CI26 452 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 DLATP10515 647 aaKnown RBP16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 EPB41P11171 864 aaKnown RBP16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 OR1G1P47890 313 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 DUOXA2Q1HG44 320 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 TDRD10Q5VZ19 366 aaKnown RBP16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 SV2AQ7L0J3 742 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 LIMS2Q7Z4I7 341 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 BEST2Q8NFU1 509 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 DDX27Q96GQ7 796 aaKnown RBP16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 GPR62Q9BZJ7 368 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 CERS4Q9HA82 394 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 SPG21Q9NZD8 308 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
CALCOCO2-211ENST00000508679 RFXAPO00287 272 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 GRM6O15303 877 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 PMM2O15305 246 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 LRRN2O75325 713 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 GNA14O95837 355 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 CTNNB1P35222 781 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 ALDH7A1P49419 539 aaKnown RBP16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 GRIN2CQ14957 1233 aa16.16■□□□□ 0.18
CALCOCO2-211ENST00000508679 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms