RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 DMRTA2Q96SC8 542 aa6.66□□□□□ -1.34
DHFR-204ENST00000508282 REXO4Q9GZR2 422 aaKnown RBP6.66□□□□□ -1.34
DHFR-204ENST00000508282 GRID2IPA4D2P6 1211 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 CDHR4A6H8M9 788 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 UNC119BA6NIH7 251 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 FOXN1O15353 648 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 SBK3P0C264 359 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 FGFR4P22455 802 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 ZNF280AP59817 542 aaPredicted RBP6.65□□□□□ -1.34
DHFR-204ENST00000508282 EXOSC10Q01780 885 aaKnown RBP6.65□□□□□ -1.34
DHFR-204ENST00000508282 LAIR1Q6GTX8 287 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 CLPTM1LQ96KA5 538 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 CEP89Q96ST8 783 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 TTPALQ9BTX7 342 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 SERHL2Q9H4I8 314 aa6.65□□□□□ -1.34
DHFR-204ENST00000508282 AATKQ6ZMQ8 1374 aa6.65□□□□□ -1.35
DHFR-204ENST00000508282 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 TMEM191CA6NGB0 347 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 GRM6O15303 877 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 SPDEFO95238 335 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 HLA-DOAP06340 250 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 CKBP12277 381 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 ZEB1P37275 1124 aaPredicted RBP6.64□□□□□ -1.35
DHFR-204ENST00000508282 NOMO3P69849 1222 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 DSC2Q02487 901 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 TLE1Q04724 770 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 TP53BP2Q13625 1128 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 NOMO2Q5JPE7 1267 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 CMTR2Q8IYT2 770 aaKnown RBP6.64□□□□□ -1.35
DHFR-204ENST00000508282 TMEM132CQ8N3T6 1108 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 FITM2Q8N6M3 262 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 NSUN6Q8TEA1 469 aaKnown RBP6.64□□□□□ -1.35
DHFR-204ENST00000508282 WDR11Q9BZH6 1224 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 RNPEPQ9H4A4 650 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 USP25Q9UHP3 1055 aa6.64□□□□□ -1.35
DHFR-204ENST00000508282 WDR33Q9C0J8 1336 aaKnown RBP6.64□□□□□ -1.35
DHFR-204ENST00000508282 A0A087X1B8 175 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 SNUPNO95149 360 aaKnown RBP6.63□□□□□ -1.35
DHFR-204ENST00000508282 HSD11B2P80365 405 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 GUCY1B3Q02153 619 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 SLFN5Q08AF3 891 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 RAB39AQ14964 217 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 ATP2B3Q16720 1220 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 PPP4R3AQ6IN85 833 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 MIER2Q8N344 545 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 NLGN4YQ8NFZ3 816 aaPredicted RBP6.63□□□□□ -1.35
DHFR-204ENST00000508282 TBC1D15Q8TC07 691 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 STAG1Q8WVM7 1258 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 CHMP4CQ96CF2 233 aa6.63□□□□□ -1.35
DHFR-204ENST00000508282 MARS2Q96GW9 593 aaKnown RBP6.63□□□□□ -1.35
DHFR-204ENST00000508282 CFAP20Q9Y6A4 193 aaKnown RBP6.63□□□□□ -1.35
DHFR-204ENST00000508282 B3GALT2O43825 422 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 RAMP2O60895 175 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 CDKL5O76039 1030 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 HAUS5O94927 633 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 MTHFD1P11586 935 aaKnown RBP6.62□□□□□ -1.35
DHFR-204ENST00000508282 NEK2P51955 445 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 ANAPC15P60006 121 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 SCAPQ12770 1279 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 FSTL1Q12841 308 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 PABPC1LQ4VXU2 614 aaKnown RBP6.62□□□□□ -1.35
DHFR-204ENST00000508282 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 ARMC6Q6NXE6 501 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 ZBTB46Q86UZ6 589 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 CPA6Q8N4T0 437 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 IL17RDQ8NFM7 739 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 NUP133Q8WUM0 1156 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 ASB10Q8WXI3 467 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 TYW1Q9NV66 732 aaKnown RBP6.62□□□□□ -1.35
DHFR-204ENST00000508282 CALCOCO1Q9P1Z2 691 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 HSFX1Q9UBD0 423 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 LUC7L2Q9Y383 392 aaKnown RBP6.62□□□□□ -1.35
DHFR-204ENST00000508282 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
DHFR-204ENST00000508282 COL4A3Q01955 1670 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 PIPSLA2A3N6 862 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 GPANK1O95872 356 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 CD1AP06126 327 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 FCER1AP12319 257 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 PROZP22891 400 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 CXADRP78310 365 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 FLYWCH1Q4VC44 716 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 Q6YL49 198 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 GADL1Q6ZQY3 521 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 TTC7BQ86TV6 843 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 NACC2Q96BF6 587 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 AGAP2Q99490 1192 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 VRK1Q99986 396 aaPredicted RBP6.61□□□□□ -1.35
DHFR-204ENST00000508282 ALOXE3Q9BYJ1 711 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 SLITRK6Q9H5Y7 841 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 DDX56Q9NY93 547 aaKnown RBP6.61□□□□□ -1.35
DHFR-204ENST00000508282 KCNE5Q9UJ90 142 aa6.61□□□□□ -1.35
DHFR-204ENST00000508282 GCP02774 474 aa6.6□□□□□ -1.35
DHFR-204ENST00000508282 MXRA7P84157 204 aa6.6□□□□□ -1.35
DHFR-204ENST00000508282 COL10A1Q03692 680 aa6.6□□□□□ -1.35
DHFR-204ENST00000508282 KHDC1Q4VXA5 237 aaKnown RBP6.6□□□□□ -1.35
DHFR-204ENST00000508282 UTP14CQ5TAP6 766 aaKnown RBP6.6□□□□□ -1.35
DHFR-204ENST00000508282 BEND2Q8NDZ0 799 aa6.6□□□□□ -1.35
DHFR-204ENST00000508282 TMEM74BQ9NUR3 256 aa6.6□□□□□ -1.35
DHFR-204ENST00000508282 SYBUQ9NX95 663 aa6.6□□□□□ -1.35
DHFR-204ENST00000508282 NOX1Q9Y5S8 564 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms