RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 USP41Q3LFD5 358 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 RABGGTAQ92696 567 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
RNF4-210ENST00000508235 TLE6Q9H808 572 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 GOLGA2P5Q9HBQ8 144 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 CACNG4Q9UBN1 327 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 TUBGCP4Q9UGJ1 667 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 MAPK8IP1Q9UQF2 711 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 NUB1Q9Y5A7 615 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.25■□□□□ 0.19
RNF4-210ENST00000508235 C2orf71A6NGG8 1288 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
RNF4-210ENST00000508235 NR3C1P04150 777 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 CREMQ03060 361 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 NFIL3Q16649 462 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 PDXDC1Q6P996 788 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 CBWD2Q8IUF1 395 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 HASPINQ8TF76 798 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 VN1R3Q9BXE9 311 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 EMILIN2Q9BXX0 1053 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 GPR62Q9BZJ7 368 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 MAN1B1Q9UKM7 699 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 COG5Q9UP83 839 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 FRMD4BQ9Y2L6 1034 aa16.25■□□□□ 0.19
RNF4-210ENST00000508235 F8W810 466 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 PSMA7O14818 248 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 SRGAP2BP0DMP2 458 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 MCM4P33991 863 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 PRCPP42785 496 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 NRIP1P48552 1158 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 DSG1Q02413 1049 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 CAMK4Q16566 473 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 DUSP6Q16828 381 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 EDRF1Q3B7T1 1238 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
RNF4-210ENST00000508235 USP37Q86T82 979 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 PPFIBP1Q86W92 1011 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
RNF4-210ENST00000508235 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 ZSWIM2Q8NEG5 633 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 FNBP1Q96RU3 617 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 TSG101Q99816 390 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 PDE11AQ9HCR9 933 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.24■□□□□ 0.19
RNF4-210ENST00000508235 CHST7Q9NS84 486 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 DPP3Q9NY33 737 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 KIAA1468Q9P260 1216 aa16.24■□□□□ 0.19
RNF4-210ENST00000508235 SZT2Q5T011 3432 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 HIDE1A8MVS5 230 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 MBD3O95983 291 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 TMEM191BP0C7N4 346 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 TFAMQ00059 246 aaKnown RBP16.23■□□□□ 0.19
RNF4-210ENST00000508235 CYP24A1Q07973 514 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 HYAL1Q12794 435 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 PSMD6Q15008 389 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 FAM171A1Q5VUB5 890 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 ADGRD2Q7Z7M1 963 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 CEP57Q86XR8 500 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 WDR49Q8IV35 697 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 EFHBQ8N7U6 833 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 HLA-CQ95604 372 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 PABPC5Q96DU9 382 aaKnown RBP16.23■□□□□ 0.19
RNF4-210ENST00000508235 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
RNF4-210ENST00000508235 ANKRD36BP1Q96IX9 119 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 TTPALQ9BTX7 342 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
RNF4-210ENST00000508235 PCDHGC5Q9Y5F6 944 aa16.23■□□□□ 0.19
RNF4-210ENST00000508235 SYN3O14994 580 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 MAPK13O15264 365 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 TNNC2P02585 160 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 ADH1AP07327 375 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 FGFR3P22607 806 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 NR2F2P24468 414 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 PNPLA4P41247 253 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 MORC3Q14149 939 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 COL19A1Q14993 1142 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 DUOXA2Q1HG44 320 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 AAK1Q2M2I8 961 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 ZCWPW2Q504Y3 356 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 KIAA0319Q5VV43 1072 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 C9orf57Q5W0N0 161 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 CENPPQ6IPU0 288 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 TAS1R1Q7RTX1 841 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 RBM23Q86U06 439 aaKnown RBP16.22■□□□□ 0.19
RNF4-210ENST00000508235 EFCAB13Q8IY85 973 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 ADSSL1Q8N142 457 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 C3orf58Q8NDZ4 430 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
RNF4-210ENST00000508235 MFSD14AQ96MC6 490 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 ZNF560Q96MR9 790 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 IGFLR1Q9H665 355 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms