RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GTF2H1P32780 548 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 PTGIRP43119 386 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 TTLL12Q14166 644 aaPredicted RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 PTGISQ16647 500 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 GJC2Q5T442 439 aaPredicted RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 FBXO16Q8IX29 292 aaPredicted RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 MCOLN2Q8IZK6 566 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 SEC14L1Q92503 715 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 EPN3Q9H201 632 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 A0A0B4J269 797 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 MIF4GDA9UHW6 222 aaKnown RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 CNMDO75829 334 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 ERLIN2O94905 339 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 SHBGP04278 402 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 CD58P19256 250 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 GJC1P36383 396 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 RPL21P46778 160 aaKnown RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 TARBP2Q15633 366 aaKnown RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 SEL1L2Q5TEA6 688 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 DCPSQ96C86 337 aaKnown RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 RPS6KC1Q96S38 1066 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 FMO2Q99518 471 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 PDGFCQ9NRA1 345 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 ZDHHC18Q9NUE0 388 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 PCDHA3Q9Y5H8 950 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 STYXL1Q9Y6J8 313 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 CNTNAP2Q9UHC6 1331 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 PAPPA2Q9BXP8 1791 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 KIAA0391O15091 583 aaKnown RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 MDH1P40925 334 aaKnown RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 CLDN10P78369 228 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 FBXW10Q5XX13 1052 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 ZDHHC24Q6UX98 284 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 SLC13A5Q86YT5 568 aaPredicted RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 CCDC105Q8IYK2 499 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 RNF149Q8NC42 400 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 HEMGNQ9BXL5 484 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 NIFKQ9BYG3 293 aaKnown RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 DIS3Q9Y2L1 958 aaKnown RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 PTPRFP10586 1907 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 SOCS7O14512 581 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 PHF2O75151 1096 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 MTA2O94776 668 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 CUL2Q13617 745 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 SIX1Q15475 284 aaPredicted RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 TRIP13Q15645 432 aaPredicted RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 CEP120Q8N960 986 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 ZNF473Q8WTR7 871 aaKnown RBP15.48■□□□□ 0.07
DDX41-208ENST00000507955 FGD4Q96M96 766 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 MTMR12Q9C0I1 747 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 WNT8AQ9H1J5 351 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 MCM3APO60318 1980 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 ADGRA2Q96PE1 1338 aa15.48■□□□□ 0.07
DDX41-208ENST00000507955 SMIM23A6NLE4 172 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 HMGB1P1B2RPK0 211 aaPredicted RBP15.47■□□□□ 0.07
DDX41-208ENST00000507955 CTNNA2P26232 953 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 NOP14P78316 857 aaKnown RBP15.47■□□□□ 0.07
DDX41-208ENST00000507955 C1orf131Q8NDD1 294 aaKnown RBP15.47■□□□□ 0.07
DDX41-208ENST00000507955 LRRC45Q96CN5 670 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 NAP1L3Q99457 506 aaPredicted RBP15.47■□□□□ 0.07
DDX41-208ENST00000507955 FAM107BQ9H098 131 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 KLHL11Q9NVR0 708 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 GRHL1Q9NZI5 618 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 USTQ9Y2C2 406 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 PPP2R3BQ9Y5P8 575 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 B4GALT5O43286 388 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 ADCY3O60266 1144 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 EDNRBP24530 442 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 GNA15P30679 374 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 TCEAL1Q15170 157 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 MMS22LQ6ZRQ5 1243 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 RHPN2Q8IUC4 686 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 MYCBPAPQ8TBZ2 947 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 SEPT1Q8WYJ6 367 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 FAM114A2Q9NRY5 505 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 CHST7Q9NS84 486 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 RBPJLQ9UBG7 517 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 ZBTB42B2RXF5 422 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 MSCO60682 206 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 ECM2O94769 699 aaPredicted RBP15.47■□□□□ 0.07
DDX41-208ENST00000507955 MYZAPP0CAP1 466 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 TCF4P15884 667 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 TMOD1P28289 359 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 NSFP46459 744 aaKnown RBP15.47■□□□□ 0.07
DDX41-208ENST00000507955 RWDD2BP57060 319 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 NCOA4Q13772 614 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 SCARA5Q6ZMJ2 495 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 ANKS1BQ7Z6G8 1248 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 PRUNE1Q86TP1 453 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 THNSL1Q8IYQ7 743 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 NLRP4Q96MN2 994 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 CCT8L2Q96SF2 557 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 RAB17Q9H0T7 212 aa15.47■□□□□ 0.07
DDX41-208ENST00000507955 EPB41L4BQ9H329 900 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms