RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MED24O75448 989 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 GCNT3O95395 438 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 GSTT1P30711 240 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 MARCKSL1P49006 195 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 MESDQ14696 234 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 KRT72Q14CN4 511 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 CLNKQ7Z7G1 428 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 ZC3H18Q86VM9 953 aaKnown RBP16.88■□□□□ 0.29
SCLT1-208ENST00000506368 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 COA7Q96BR5 231 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 HAPLN3Q96S86 360 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 PCMTD2Q9NV79 361 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 TAS2R14Q9NYV8 317 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 SEL1LQ9UBV2 794 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
SCLT1-208ENST00000506368 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
SCLT1-208ENST00000506368 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
SCLT1-208ENST00000506368 UMODL1Q5DID0 1318 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 ZBED4O75132 1171 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 CYP1A2P05177 515 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 MYL7Q01449 175 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 FAM91A1Q658Y4 838 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 HS2ST1Q7LGA3 356 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 UCMAQ8WVF2 138 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 ANKFY1Q9P2R3 1169 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 GTF3C4Q9UKN8 822 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 SH3BP1Q9Y3L3 701 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 GMEB1Q9Y692 573 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 CAPN9O14815 690 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 GSC2O15499 205 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 TGFB1I1O43294 461 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 KCNJ1P48048 391 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 CTC1Q2NKJ3 1217 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 FAM43BQ6ZT52 329 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 ANKS1BQ7Z6G8 1248 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 ZNF564Q8TBZ8 553 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 NSL1Q96IY1 281 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 CADM1Q9BY67 442 aaKnown RBP16.87■□□□□ 0.29
SCLT1-208ENST00000506368 PPP1R12CQ9BZL4 782 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 NDUFA13Q9P0J0 144 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 FETUBQ9UGM5 382 aa16.87■□□□□ 0.29
SCLT1-208ENST00000506368 ZNF536O15090 1300 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 EIF4E1BA6NMX2 242 aaKnown RBP16.86■□□□□ 0.29
SCLT1-208ENST00000506368 HGSO14964 777 aaPredicted RBP16.86■□□□□ 0.29
SCLT1-208ENST00000506368 CBX6O95503 412 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 SERPINB4P48594 390 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 FOXB2Q5VYV0 432 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 CATSPER3Q86XQ3 398 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 MCUR1Q96AQ8 359 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 CEP95Q96GE4 821 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 TRABDQ9H4I3 376 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 SLC24A2Q9UI40 661 aa16.86■□□□□ 0.29
SCLT1-208ENST00000506368 USP17L5A8MUK1 530 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 MAP3K13O43283 966 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 HAUS5O94927 633 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 AP3B2Q13367 1082 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 GRAPQ13588 217 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 TMED2Q15363 201 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 PABPC1LQ4VXU2 614 aaKnown RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 HHATQ5VTY9 493 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 STYK1Q6J9G0 422 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 PSPC1Q8WXF1 523 aaKnown RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 FAM81BQ96LP2 452 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 NDNQ99608 321 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 SPATA16Q9BXB7 569 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 UBA5Q9GZZ9 404 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 PSTPIP2Q9H939 334 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 DMAC2Q9NW81 257 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 TBK1Q9UHD2 729 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 CIDEBQ9UHD4 219 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 EXOC1LA0A1B0GW35 172 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 WTIPA6NIX2 430 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 TMEM110-MUSTN1A8MSY1 372 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 GYG2O15488 501 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 ADCY8P40145 1251 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 SLC1A1P43005 524 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 MAGEA8P43361 318 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 KCTD19Q17RG1 926 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 ACSBG2Q5FVE4 666 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 RASIP1Q5U651 963 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 POTEGQ6S5H5 508 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 NME8Q8N427 588 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 ZCCHC9Q8N567 271 aaKnown RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 FAM20AQ96MK3 541 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 IWS1Q96ST2 819 aa16.85■□□□□ 0.29
SCLT1-208ENST00000506368 POLR3CQ9BUI4 534 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-208ENST00000506368 ASCC2Q9H1I8 757 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms