RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 ZBTB34Q8NCN2 500 aa6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 TTC17Q96AE7 1141 aa6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 CPEB1Q9BZB8 566 aaKnown RBP6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 RLIMQ9NVW2 624 aa6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 ABCF2Q9UG63 623 aa6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 TSC22D4Q9Y3Q8 395 aa6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 PNPLA7Q6ZV29 1317 aa6.21□□□□□ -1.42
NDFIP1-203ENST00000505614 KLRG2A4D1S0 409 aaPredicted RBP6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 DRGXA6NNA5 263 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 H3BUI4 141 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 TRIM24O15164 1050 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 SLC43A1O75387 559 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 HAUS5O94927 633 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 HRGP04196 525 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 GNAI3P08754 354 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 GNAI1P63096 354 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 FGL2Q14314 439 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 RRP1BQ14684 758 aaKnown RBP6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 BRIX1Q8TDN6 353 aaKnown RBP6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 MYOCQ99972 504 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 SARS2Q9NP81 518 aaKnown RBP6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 CNNM1Q9NRU3 951 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 CFAP97Q9P2B7 532 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 GABBR1Q9UBS5 961 aa6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
NDFIP1-203ENST00000505614 TCRBV7S2A1N4TA0A589 114 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 LRRC14BA6NHZ5 514 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 NT5C1B-RDH14C9J2C7 533 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 F2RL2O00254 374 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 WNT10BO00744 389 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 PRC1O43663 620 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 CAND2O75155 1236 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 SPATA31D3P0C874 917 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 PRDX5P30044 214 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 PIK3CGP48736 1102 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 SCNN1GP51170 649 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 AGFG1P52594 562 aaKnown RBP6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 NKX6-1P78426 367 aaPredicted RBP6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 R3HDM1Q15032 1099 aaKnown RBP6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 C1QL3Q5VWW1 255 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 Q6ZRM9 215 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 SPATA31D4Q6ZUB0 917 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 CHST15Q7LFX5 561 aaPredicted RBP6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 UBE3BQ7Z3V4 1068 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 PDSS2Q86YH6 399 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 TMPRSS6Q8IU80 811 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 DCBLD1Q8N8Z6 715 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 RNF169Q8NCN4 708 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 SLC35A4Q96G79 324 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 GSTO2Q9H4Y5 243 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 PARPBPQ9NWS1 579 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 EIF2B4Q9UI10 523 aaKnown RBP6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 ZDHHC8Q9ULC8 765 aa6.19□□□□□ -1.42
NDFIP1-203ENST00000505614 CAPN8A6NHC0 703 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 ZNF20P17024 532 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 CACNB3P54284 484 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 ADAM17P78536 824 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 PLS1Q14651 629 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 PPP4R4Q6NUP7 873 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 MED25Q71SY5 747 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 OVCH2Q7RTZ1 564 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 FAM90A1Q86YD7 464 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 PPP1R35Q8TAP8 253 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 NUP133Q8WUM0 1156 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 DDX17Q92841 729 aaKnown RBP6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 SIK2Q9H0K1 926 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 ZNF703Q9H7S9 590 aaPredicted RBP6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 BRD9Q9H8M2 597 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
NDFIP1-203ENST00000505614 PPFIA4O75335 1185 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 ZBED1O96006 694 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 CKBP12277 381 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 CHN2P52757 468 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 RAB1AP62820 205 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 NHLH2Q02577 135 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 GRM3Q14832 879 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 CSRP2Q16527 193 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 CCDC93Q567U6 631 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 RABL3Q5HYI8 236 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 CCSAPQ6IQ19 270 aaPredicted RBP6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 NPNTQ6UXI9 565 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 ZNF365Q70YC5 407 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 PRRT2Q7Z6L0 340 aaPredicted RBP6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 RHOT2Q8IXI1 618 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 KIAA0319LQ8IZA0 1049 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 SH2D3CQ8N5H7 860 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 PGBD4Q96DM1 585 aa6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 MRPL46Q9H2W6 279 aaKnown RBP6.17□□□□□ -1.42
NDFIP1-203ENST00000505614 GAGE12BA1L429 117 aa6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 GAGE12HA6NDE8 117 aa6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 PEX11BO96011 259 aa6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 CHEK2O96017 543 aa6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 ITGB1P05556 798 aa6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 KRT18P05783 430 aaKnown RBP6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 GCSHP23434 173 aa6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
NDFIP1-203ENST00000505614 FAM193AP78312 1265 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms