RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 AARSP49588 968 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTSB-205ENST00000505496 KNOP1Q1ED39 458 aaKnown RBP9.47□□□□□ -0.89
CTSB-205ENST00000505496 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
CTSB-205ENST00000505496 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 RTP2Q5QGT7 225 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 SPATA1Q5VX52 437 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
CTSB-205ENST00000505496 RBM23Q86U06 439 aaKnown RBP9.47□□□□□ -0.89
CTSB-205ENST00000505496 NT5DC4Q86YG4 428 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 BRSK2Q8IWQ3 736 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 ZSWIM2Q8NEG5 633 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.47□□□□□ -0.89
CTSB-205ENST00000505496 SLC22A17Q8WUG5 538 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 AUTS2Q8WXX7 1259 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 TTPALQ9BTX7 342 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTSB-205ENST00000505496 AGPAT3Q9NRZ7 376 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 EXOC1Q9NV70 894 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 CLDND1Q9NY35 253 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 TUBGCP4Q9UGJ1 667 aa9.47□□□□□ -0.89
CTSB-205ENST00000505496 UBQLN1Q9UMX0 589 aaKnown RBP9.47□□□□□ -0.89
CTSB-205ENST00000505496 TCHHQ07283 1943 aa9.46□□□□□ -0.89
CTSB-205ENST00000505496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.46□□□□□ -0.9
CTSB-205ENST00000505496 ANO9A1A5B4 782 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 H3BQ06 376 aaPredicted RBP9.46□□□□□ -0.9
CTSB-205ENST00000505496 TEX28O15482 410 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 XPOTO43592 962 aaKnown RBP9.46□□□□□ -0.9
CTSB-205ENST00000505496 TRAPPC3O43617 180 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 URODP06132 367 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 NFICP08651 508 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 HOXB8P17481 243 aaPredicted RBP9.46□□□□□ -0.9
CTSB-205ENST00000505496 CLCN4P51793 760 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 WNT7BP56706 349 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 RBM10P98175 930 aaKnown RBP9.46□□□□□ -0.9
CTSB-205ENST00000505496 CREMQ03060 361 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 TMEM132DQ14C87 1099 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 JADE1Q6IE81 842 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 ARMCX5Q6P1M9 558 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 PPFIBP1Q86W92 1011 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 GPD1LQ8N335 351 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 CXorf38Q8TB03 319 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 LNX1Q8TBB1 728 aaPredicted RBP9.46□□□□□ -0.9
CTSB-205ENST00000505496 HASPINQ8TF76 798 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 SAAL1Q96ER3 474 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 CCDC34Q96HJ3 373 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 KLHL5Q96PQ7 755 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 FAM213AQ9BRX8 229 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 EMILIN2Q9BXX0 1053 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 S1PR5Q9H228 398 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 KCTD10Q9H3F6 313 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 KIAA1586Q9HCI6 787 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 DMAC2Q9NW81 257 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 HSPBP1Q9NZL4 362 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 HCFC2Q9Y5Z7 792 aa9.46□□□□□ -0.9
CTSB-205ENST00000505496 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 M0QZQ0 153 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 PIRO00625 290 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 PDXKO00764 312 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 SYN3O14994 580 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 TBC1D4O60343 1298 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 SRGAP2BP0DMP2 458 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 PAX3P23760 479 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 NDUFV1P49821 464 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 KCNQ1P51787 676 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 SPAG1Q07617 926 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 MRPL58Q14197 206 aaKnown RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 MYBPC2Q14324 1141 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 SMAD2Q15796 467 aaKnown RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 NFIL3Q16649 462 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 COBLL1Q53SF7 1204 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 FAM171A1Q5VUB5 890 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 C9orf57Q5W0N0 161 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 KIAA1841Q6NSI8 718 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 ANKRD54Q6NXT1 300 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 PDXDC1Q6P996 788 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 LILRA6Q6PI73 481 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 SYCE2Q6PIF2 218 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 HS2ST1Q7LGA3 356 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 NELFCDQ8IXH7 590 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 EFCAB13Q8IY85 973 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 TMEM130Q8N3G9 435 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 GUF1Q8N442 669 aaKnown RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 BEST2Q8NFU1 509 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 RIN2Q8WYP3 895 aaPredicted RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 SUSD6Q92537 303 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 CASP10Q92851 521 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 B3GALT6Q96L58 329 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
CTSB-205ENST00000505496 GSDMAQ96QA5 445 aa9.45□□□□□ -0.9
CTSB-205ENST00000505496 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms