RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 SND1Q7KZF4 910 aaKnown RBP eCLIP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 PHF13Q86YI8 300 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CD302Q8IX05 232 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 C1orf131Q8NDD1 294 aaKnown RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 TATDN2Q93075 761 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 PARP2Q9UGN5 583 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CEP83Q9Y592 693 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 PCDHB4Q9Y5E5 795 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 ZBTB42B2RXF5 422 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 SPOPO43791 374 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 TMEM191BP0C7N4 346 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 UNGP13051 313 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 P4HA1P13674 534 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CETN2P41208 172 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 DNA2P51530 1060 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 PPFIA1Q13136 1202 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 GPR162Q16538 588 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF410Q86VK4 478 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 RRN3P2A6NIE6 340 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 VNN1O95497 513 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 C22orf31O95567 290 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 LGALS2P05162 132 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 CALB1P05937 261 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 RWDD2BP57060 319 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 GUCY2DQ02846 1103 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 GRB14Q14449 540 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 EFCAB12Q6NXP0 572 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 ASB7Q9H672 318 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 EPB41L5Q9HCM4 733 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 HOMER3Q9NSC5 361 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 PCDHA3Q9Y5H8 950 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 FAM189A1O60320 539 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 FGGP02679 453 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 ACO1P21399 889 aaKnown RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 GNA15P30679 374 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 ATICP31939 592 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 CFAP58Q5T655 872 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 MCOLN2Q8IZK6 566 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 RBBP8NLQ8NC74 664 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 PTPRHQ9HD43 1115 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 COG5Q9UP83 839 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 PODXLO00592 558 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 RAD51CO43502 376 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 MARK3P27448 753 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF132P52740 706 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 DRG2P55039 364 aaKnown RBP12.11□□□□□ -0.47
NFKB1-205ENST00000505458 PLEKHH3Q7Z736 793 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
NFKB1-205ENST00000505458 BTBD19C9JJ37 291 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 PHF2O75151 1096 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 TAPT1Q6NXT6 567 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 UBR7Q8N806 425 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 CD101Q93033 1021 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 ABLIM1O14639 778 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 MED7O43513 233 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 FNTAP49354 379 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 DLK2Q6UY11 383 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 SYDE1Q6ZW31 735 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-205ENST00000505458 KLHL7Q8IXQ5 586 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-205ENST00000505458 HAPLN2Q9GZV7 340 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 FEZ2Q9UHY8 353 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-205ENST00000505458 PSTPIP1O43586 416 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-205ENST00000505458 MESDQ14696 234 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 ZBTB45Q96K62 511 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-205ENST00000505458 TSPAN18Q96SJ8 248 aa12.1□□□□□ -0.47
NFKB1-205ENST00000505458 MYO1FO00160 1098 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 CAPN15O75808 1086 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 COMTP21964 271 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
NFKB1-205ENST00000505458 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 C12orf50Q8NA57 414 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-205ENST00000505458 DNAI2Q9GZS0 605 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms