RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ING5Q8WYH8 240 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 PIK3R5Q8WYR1 880 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 IFT74Q96LB3 600 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 TTPALQ9BTX7 342 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 PLA2G2FQ9BZM2 168 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 HCFC1R1Q9NWW0 138 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 MRPS23Q9Y3D9 190 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 FAM208BQ5VWN6 2430 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 SHC2P98077 582 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 PPP2R5AQ15172 486 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 AXDND1Q5T1B0 1012 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 PDXDC1Q6P996 788 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 GSTCDQ8NEC7 633 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 LNX1Q8TBB1 728 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 MCRS1Q96EZ8 462 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 PDZD7Q9H5P4 517 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 SNTG2Q9NY99 539 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 GDE1Q9NZC3 331 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 DNMT3BQ9UBC3 853 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 CACNG4Q9UBN1 327 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 LRWD1Q9UFC0 647 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 GREB1Q4ZG55 1949 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 TICRRQ7Z2Z1 1910 aa17.62■□□□□ 0.41
PDLIM7-213ENST00000505074 VWA8A3KMH1 1905 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 CASTOR2A6NHX0 329 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 SHISA7A6NL88 538 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 CYP11B2P19099 503 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 NAMPTP43490 491 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 TRAPPC10P48553 1259 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 N4BP2L1Q5TBK1 243 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 ELSPBP1Q96BH3 223 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 KIFC3Q9BVG8 833 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 RAB34Q9BZG1 259 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 BHMT2Q9H2M3 363 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 FZD8Q9H461 694 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 BRD9Q9H8M2 597 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 POLD4Q9HCU8 107 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 KIAA1024Q9UPX6 916 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 USP20Q9Y2K6 914 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 GDAQ9Y2T3 454 aa17.61■□□□□ 0.41
PDLIM7-213ENST00000505074 ATRXP46100 2492 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 TTLL13PA6NNM8 815 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 RECQL4O94761 1208 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 CNR2P34972 360 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 CXCL12P48061 93 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 TUSC3Q13454 348 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 FAM187BQ17R55 369 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 TANGO2Q6ICL3 276 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 RTL10Q7L3V2 364 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 FAM3CQ92520 227 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 ZMYM2Q9UBW7 1377 aa17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 PDCD11Q14690 1871 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-213ENST00000505074 ACKR2O00590 384 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 HRO43593 1189 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 THP07101 528 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 PROS1P07225 676 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 MUTP22033 750 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 RAB33AQ14088 237 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 ECM1Q16610 540 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 KIFAP3Q92845 792 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 PAAF1Q9BRP4 392 aa17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 CNOT1A5YKK6 2376 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-213ENST00000505074 COL4A2P08572 1712 aa17.58■□□□□ 0.41
PDLIM7-213ENST00000505074 F5P12259 2224 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 ADAM12O43184 909 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 RHOP08100 348 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 OR1D2P34982 312 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 LIMK1P53667 647 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 PTGDRQ13258 359 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 ACAP1Q15027 740 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 ZRSR1Q15695 479 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 DCAF4L1Q3SXM0 396 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 AASDHQ4L235 1098 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 APBB1IPQ7Z5R6 666 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 IRF7Q92985 503 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 TRMT61BQ9BVS5 477 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 CCDC113Q9H0I3 377 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 ZFP14Q9HCL3 533 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 STK24Q9Y6E0 443 aa17.58■□□□□ 0.4
PDLIM7-213ENST00000505074 CHURC1-FNTBB4DL54 471 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 PTGESO14684 152 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 KIF4AO95239 1232 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 EDN1P05305 212 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 FNTBP49356 437 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 EFNA5P52803 228 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 SATB1Q01826 763 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms