RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 A0A1B0GTH6 734 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 H3BNC9 293 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 MYL5Q02045 173 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 ADAM9Q13443 819 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 STIM1Q13586 685 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 HS2ST1Q7LGA3 356 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 HELQQ8TDG4 1101 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 SUSD3Q96L08 255 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 UBE2OQ9C0C9 1292 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZBP1Q9H171 429 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 COLQQ9Y215 455 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 SIK3Q9Y2K2 1263 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 LAG3P18627 525 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZNF132P52740 706 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 ANO6Q4KMQ2 910 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 TMEM184AQ6ZMB5 413 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 TRMT1LQ7Z2T5 733 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 NELFCDQ8IXH7 590 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 HACE1Q8IYU2 909 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 OR5B17Q8NGF7 314 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 OXCT2Q9BYC2 517 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 GPR88Q9GZN0 384 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 MTIF3Q9H2K0 278 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 CBX8Q9HC52 389 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 TUBGCP4Q9UGJ1 667 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 MAFFQ9ULX9 164 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 SOX1O00570 391 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 TACC1O75410 805 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 VAMP7P51809 220 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 OTOP2Q7RTS6 562 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 SAAL1Q96ER3 474 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 RNPC3Q96LT9 517 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 RTP3Q9BQQ7 232 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 FAM213AQ9BRX8 229 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 RPF1Q9H9Y2 349 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 HSFX1Q9UBD0 423 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 SYCE3A1L190 88 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 ASS1P00966 412 aaKnown RBP8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 AKAP5P24588 427 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 SLC11A1P49279 550 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 KIAA0319Q5VV43 1072 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 DCLRE1AQ6PJP8 1040 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 FAM200AQ8TCP9 573 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 ERGIC2Q96RQ1 377 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 FNIP2Q9P278 1114 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CDH23Q9H251 3354 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 EPOPA6NHQ4 379 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CLIC2O15247 247 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 TYMPP19971 482 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 BMPR1AP36894 532 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 ACOT2P49753 483 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CBWD6Q4V339 395 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CBWD3Q5JTY5 395 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CBWD5Q5RIA9 395 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 PDE12Q6L8Q7 609 aaKnown RBP8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 FAM186BQ8IYM0 893 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 GAD1Q99259 594 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 TSG101Q99816 390 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 TTYH1Q9H313 450 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 PLCB1Q9NQ66 1216 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CETN3O15182 167 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 SPTLC1O15269 473 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 STX10O60499 249 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 OAZ2O95190 189 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 THP07101 528 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 ASPAP45381 313 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 BCAR1P56945 870 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 JAM2P57087 298 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 NR1I3Q14994 352 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 CDR2LQ86X02 465 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 IGSF21Q96ID5 467 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 DNAJB4Q9UDY4 337 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 ITIH6Q6UXX5 1313 aa8.97□□□□□ -0.97
CDC42SE2-208ENST00000505065 IGFBP6P24592 240 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 DNAJB1P25685 340 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 RPL34P49207 117 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 DSG1Q02413 1049 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 NFX1Q12986 1120 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 TMEM132DQ14C87 1099 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 MEA1Q16626 185 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 FIGNQ5HY92 759 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 DPH6Q7L8W6 267 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 GAS2L3Q86XJ1 694 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 C18orf25Q96B23 403 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 DNAJC25Q9H1X3 360 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 ANKFY1Q9P2R3 1169 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 BIN1O00499 593 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 NOL4O94818 638 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 VNN2O95498 520 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 FGFR1OPO95684 399 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 ACO1P21399 889 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 WARSP23381 471 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 SCNN1GP51170 649 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 CHMP4BP1P59074 171 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 GLB1LQ6UWU2 654 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms