RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 EPHA5P54756 1037 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 PTENP60484 403 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 RING1Q06587 406 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 HSP90AA2PQ14568 343 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 MXD4Q14582 209 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 LPAL2Q16609 132 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 UGCGQ16739 394 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 PFKFB3Q16875 520 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 LONRF3Q496Y0 759 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 Q4G0T1 1027 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 PRR16Q569H4 304 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 RTP2Q5QGT7 225 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 AXDND1Q5T1B0 1012 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 SMYD5Q6GMV2 418 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 MOXD1Q6UVY6 613 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 ANO5Q75V66 913 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 RALGPS2Q86X27 583 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 CAMKK1Q8N5S9 505 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 ZNF461Q8TAF7 563 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 BICD2Q8TD16 824 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 CCDC12Q8WUD4 166 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 TCP11Q8WWU5 503 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 PRPF31Q8WWY3 499 aaKnown RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 PSPC1Q8WXF1 523 aaKnown RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 SMARCD2Q92925 531 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 ZNF668Q96K58 619 aaPredicted RBP6.69□□□□□ -1.34
GYPB-204ENST00000504951 ASB16Q96NS5 453 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 ESYT1Q9BSJ8 1104 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 C22orf23Q9BZE7 217 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 BRD9Q9H8M2 597 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 MINDY3Q9H8M7 445 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 MTRRQ9UBK8 725 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 SPAG17Q6Q759 2223 aa6.69□□□□□ -1.34
GYPB-204ENST00000504951 PCNX2A6NKB5 2137 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
GYPB-204ENST00000504951 COL4A2P08572 1712 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 A0A1B0GUA9 196 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 MYBPHLA2RUH7 354 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 UPK3BL1B0FP48 263 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 UPK3BL2E5RIL1 263 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 CCL16O15467 120 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 GAS7O60861 476 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 RPL17P18621 184 aaKnown RBP6.68□□□□□ -1.34
GYPB-204ENST00000504951 FGFR3P22607 806 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 CDC27P30260 824 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 RFC5P40937 340 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 SCNN1GP51170 649 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 PSMC5P62195 406 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
GYPB-204ENST00000504951 FCHO2Q0JRZ9 810 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 LAMTOR4Q0VGL1 99 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 TUSC3Q13454 348 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 CCINQ13939 588 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 SF3A2Q15428 464 aaKnown RBP6.68□□□□□ -1.34
GYPB-204ENST00000504951 PSMD5Q16401 504 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 AMHR2Q16671 573 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 ADCK5Q3MIX3 580 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 FAM78AQ5JUQ0 283 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 DAB2IPQ5VWQ8 1189 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 JAKMIP3Q5VZ66 844 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 SLC8B1Q6J4K2 584 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 APOA5Q6Q788 366 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 SYNE3Q6ZMZ3 975 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 FERMT3Q86UX7 667 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 KSR1Q8IVT5 923 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 TCEAL8Q8IYN2 117 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 FAM177A1Q8N128 213 aaPredicted RBP6.68□□□□□ -1.34
GYPB-204ENST00000504951 REXO1Q8N1G1 1221 aaKnown RBP6.68□□□□□ -1.34
GYPB-204ENST00000504951 SLC7A14Q8TBB6 771 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 SLC7A3Q8WY07 619 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 THAP11Q96EK4 314 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 MCRS1Q96EZ8 462 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 NLRP4Q96MN2 994 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 TEKT3Q9BXF9 490 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 ARRDC1-AS1Q9H2J1 176 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 UNC45AQ9H3U1 944 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 C6orf50Q9HD87 102 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 OBP2AQ9NY56 170 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 ANKFY1Q9P2R3 1169 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 PIAS3Q9Y6X2 628 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 COL4A3Q01955 1670 aa6.68□□□□□ -1.34
GYPB-204ENST00000504951 ASH1LQ9NR48 2969 aaKnown RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 DMXL2Q8TDJ6 3036 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 WDR27A2RRH5 827 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 F8W810 466 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 H0Y626 953 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 ZNF263O14978 683 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 ADAM12O43184 909 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 TSPAN1O60635 241 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 TRIM16O95361 564 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 CPA1P15085 419 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 OR1D2P34982 312 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 MLH1P40692 756 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 QARSP47897 775 aaKnown RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 INSM1Q01101 510 aaPredicted RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 NAB2Q15742 525 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 SLC5A9Q2M3M2 681 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms