RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 MED14O60244 1454 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 KAT6BQ8WYB5 2073 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 PIK3R4Q99570 1358 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 ZNF335Q9H4Z2 1342 aaPredicted RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 hCG_1642624A0A1W2PR95 340 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 C2orf71A6NGG8 1288 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 A6NNZ2 444 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 FAM47E-STBD1D6RA91 191 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 H3BML4 177 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 AURKAO14965 403 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 TIMM44O43615 452 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 H2AFYO75367 372 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 REC8O95072 547 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 CD3EP07766 207 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 POU2F2P09086 479 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 HSD3B1P14060 373 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 ADRA1BP35368 520 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 GTF2A2P52657 109 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 LACTBP83111 547 aaPredicted RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 SMAD3P84022 425 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 IFIT5Q13325 482 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 SEMA5AQ13591 1074 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 ACAP2Q15057 778 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 ZNF174Q15697 407 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 SMAD2Q15796 467 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 CLUL1Q15846 466 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 DPY19L1Q2PZI1 675 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 ZSCAN23Q3MJ62 389 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 HYIQ5T013 277 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 CAVIN1Q6NZI2 390 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 GAS2L3Q86XJ1 694 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 FAM126BQ8IXS8 530 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 FAM184AQ8NB25 1140 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 DEPTORQ8TB45 409 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 SNRNP27Q8WVK2 155 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 C1GALT1C1Q96EU7 318 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 MPP4Q96JB8 637 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 MAP3K14Q99558 947 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 ACO2Q99798 780 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 ISCA1Q9BUE6 129 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 C14orf93Q9H972 538 aaKnown RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 TOPORSQ9NS56 1045 aaPredicted RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 CCM2LQ9NUG4 571 aaPredicted RBP4.78□□□□□ -1.64
RFC1-208ENST00000504849 PTCH1Q13635 1447 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 PPIP5K1Q6PFW1 1433 aa4.78□□□□□ -1.64
RFC1-208ENST00000504849 TRBV23OR9-2A0A075B6M9 112 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 LETM1O95202 739 aaPredicted RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 TPM3P06753 285 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 COMTP21964 271 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 BMP5P22003 454 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 YY1P25490 414 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 GRK6P43250 576 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 DNM2P50570 870 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 RIPK4P57078 832 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 GEMIN4P57678 1058 aaKnown RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 GNAI1P63096 354 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 MRPS21P82921 87 aaKnown RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 ZNF267Q14586 743 aaPredicted RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 KCTD2Q14681 263 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 CRY1Q16526 586 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 DACT2Q5SW24 774 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 DARS2Q6PI48 645 aaKnown RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 LRSAM1Q6UWE0 723 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 CCDC149Q6ZUS6 474 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 FRMD7Q6ZUT3 714 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 DPP9Q86TI2 863 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 C1orf210Q8IVY1 113 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 ZZZ3Q8IYH5 903 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 KRT78Q8N1N4 520 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 GPATCH11Q8N954 259 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 ZBTB34Q8NCN2 500 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 FAM156AQ8NDB6 213 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 PLEKHO2Q8TD55 490 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 JADE3Q92613 823 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 SKA1Q96BD8 255 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 PDLIM2Q96JY6 352 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 PLEKHG4BQ96PX9 1271 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 ZDHHC5Q9C0B5 715 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 RSAD1Q9HA92 442 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 ARFGAP3Q9NP61 516 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 ZNF277Q9NRM2 450 aaPredicted RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 H2AFY2Q9P0M6 372 aaPredicted RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 FBXO2Q9UK22 296 aaPredicted RBP4.77□□□□□ -1.65
RFC1-208ENST00000504849 ADAM29Q9UKF5 820 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 QRICH2Q9H0J4 1663 aa4.77□□□□□ -1.65
RFC1-208ENST00000504849 SLC12A8A0AV02 714 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 RASA4BC9J798 803 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 INO80B-WBP1J3KQ70 363 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 STXBP3O00186 592 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 ADGRB1O14514 1584 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 RASA4O43374 803 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 TLR5O60602 858 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 MSCO60682 206 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 PQBP1O60828 265 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 TUSC2O75896 110 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 AGXTP21549 392 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 SEPHS1P49903 392 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 CACNB3P54284 484 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 TBX2Q13207 712 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms