RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SLC10A6Q3KNW5 377 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 SERINC5Q86VE9 423 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 EFCAB13Q8IY85 973 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 CXorf38Q8TB03 319 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 DNAJB3Q8WWF6 145 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 DDX1Q92499 740 aaKnown RBP14.28□□□□□ -0.12
LMNA-220ENST00000504687 SCLT1Q96NL6 688 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 ACAP3Q96P50 834 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 XYLT2Q9H1B5 865 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 APOBEC3GQ9HC16 384 aaKnown RBP14.28□□□□□ -0.12
LMNA-220ENST00000504687 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 MEFVO15553 781 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 PHACTR2O75167 634 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 RTN2O75298 545 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 TRPA1O75762 1119 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 CXCL8P10145 99 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 CHRNB2P17787 502 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 PDE6CP51160 858 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 NBPF20Q3BBV1 942 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 SEZ6Q53EL9 994 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 LMBRD2Q68DH5 695 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 TRIM72Q6ZMU5 477 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 CATSPER4Q7RTX7 472 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 NOP9Q86U38 636 aaKnown RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 RSPH3Q86UC2 560 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 GLYCTKQ8IVS8 523 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 CEP120Q8N960 986 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 CPB2Q96IY4 423 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 ZNF668Q96K58 619 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 TSEN34Q9BSV6 310 aaKnown RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 CCDC94Q9BW85 323 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 CELF4Q9BZC1 486 aaKnown RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 MTMR12Q9C0I1 747 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 FAM49AQ9H0Q0 323 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 DDX20Q9UHI6 824 aaKnown RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 SALL4Q9UJQ4 1053 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 ITGA11Q9UKX5 1188 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 NUB1Q9Y5A7 615 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.27□□□□□ -0.13
LMNA-220ENST00000504687 CAPN6Q9Y6Q1 641 aa14.27□□□□□ -0.13
LMNA-220ENST00000504687 MYH10P35580 1976 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 MACROD2A1Z1Q3 448 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 LACTBL1A8MY62 500 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 CYP26A1O43174 497 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 CAND2O75155 1236 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 MTA2O94776 668 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 SGPL1O95470 568 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 CST3P01034 146 aaPredicted RBP14.26□□□□□ -0.13
LMNA-220ENST00000504687 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
LMNA-220ENST00000504687 GALCP54803 685 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 YWHAEP62258 255 aaKnown RBP14.26□□□□□ -0.13
LMNA-220ENST00000504687 MRPS6P82932 125 aaKnown RBP14.26□□□□□ -0.13
LMNA-220ENST00000504687 FMO1Q01740 532 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 TRIM32Q13049 653 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 ZBTB6Q15916 424 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 XKR4Q5GH76 650 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 ALKAL1Q6UXT8 129 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 FAM43BQ6ZT52 329 aaPredicted RBP14.26□□□□□ -0.13
LMNA-220ENST00000504687 SLFN11Q7Z7L1 901 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 TTC39CQ8N584 583 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 CEP112Q8N8E3 955 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 CD99L2Q8TCZ2 262 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
LMNA-220ENST00000504687 RFFLQ8WZ73 363 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 OSMRQ99650 979 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 PI4K2AQ9BTU6 479 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 SEZ6LQ9BYH1 1024 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 BCO2Q9BYV7 579 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 CDHR5Q9HBB8 845 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 TFR2Q9UP52 801 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
LMNA-220ENST00000504687 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 EFCAB8A8MWE9 144 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CES2O00748 559 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 FKTNO75072 461 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 PGK1P00558 417 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 ASGR1P07306 291 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
LMNA-220ENST00000504687 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
LMNA-220ENST00000504687 TFAMQ00059 246 aaKnown RBP14.25□□□□□ -0.13
LMNA-220ENST00000504687 TRPC3Q13507 836 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CXCL17Q6UXB2 119 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 RNF180Q86T96 592 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 SLC47A2Q86VL8 602 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 RHOT2Q8IXI1 618 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 TMEM192Q8IY95 271 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
LMNA-220ENST00000504687 C1orf127Q8N9H9 656 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CTNNBL1Q8WYA6 563 aaPredicted RBP14.25□□□□□ -0.13
LMNA-220ENST00000504687 RPGRIP1Q96KN7 1286 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 SNX27Q96L92 541 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CYP3A43Q9HB55 503 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CHST12Q9NRB3 414 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CNTN3Q9P232 1028 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 RNF14Q9UBS8 474 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms