RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 IER5LQ5T953 404 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 SLC8B1Q6J4K2 584 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 POTEHQ6S545 545 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 UBALD2Q8IYN6 164 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 MYCT1Q8N699 235 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 LINC00301Q8NCQ3 95 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 SMG7Q92540 1137 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 KCNH6Q9H252 994 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 STK17AQ9UEE5 414 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 DPP7Q9UHL4 492 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 ANKRD63C9JTQ0 380 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 K7ENM7 598 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 CLDN3O15551 220 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 ABLIM3O94929 683 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 SCP2P22307 547 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 RPL9P32969 192 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 OR1D2P34982 312 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 VCPP55072 806 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 PDXDC1Q6P996 788 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 ZNF720Q7Z2F6 126 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 FBXL6Q8N531 539 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 PRSS33Q8NF86 280 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 PBXIP1Q96AQ6 731 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 MFSD14AQ96MC6 490 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 PLEKHA5Q9HAU0 1116 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 CPSF3Q9UKF6 684 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 CDY1Q9Y6F8 540 aa15.27■□□□□ 0.04
PDLIM7-211ENST00000504318 DMDP11532 3685 aa15.27■□□□□ 0.03
PDLIM7-211ENST00000504318 WDR27A2RRH5 827 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 LACTBL1A8MY62 500 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 SYN3O14994 580 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 OGTO15294 1046 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 FAM13AO94988 1023 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 C8AP07357 584 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 CLTAP09496 248 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 ADSSP30520 456 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 ROR1Q01973 937 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 SPAG1Q07617 926 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 E2F4Q16254 413 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 VARS2Q5ST30 1063 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 ANKS3Q6ZW76 656 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 SFR1Q86XK3 245 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 DDX12PQ92771 950 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 FGFBP2Q9BYJ0 223 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 PIEZO1Q92508 2521 aa15.26■□□□□ 0.03
PDLIM7-211ENST00000504318 MYO15AQ9UKN7 3530 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 ANHXE9PGG2 379 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 M0QZQ0 153 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 PPEF2O14830 753 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 HNRNPDLO14979 420 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 VNN2O95498 520 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 CYP3A5P20815 502 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 GUCY2FP51841 1108 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 NTHL1P78549 312 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 KCNA1Q09470 495 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 CRELD2Q6UXH1 353 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 KRI1Q8N9T8 703 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 RSAD2Q8WXG1 361 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 FAM122AQ96E09 287 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 DUSP12Q9UNI6 340 aa15.25■□□□□ 0.03
PDLIM7-211ENST00000504318 ARHGEF37A1IGU5 675 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 NRG2O14511 850 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 TRAPPC3O43617 180 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 NARSO43776 548 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 NPR3P17342 541 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 LIG4P49917 911 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 CASP5P51878 434 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 TCF15Q12870 199 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 PKP1Q13835 747 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 UVSSAQ2YD98 709 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 AXDND1Q5T1B0 1012 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 RRAGBQ5VZM2 374 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 CWF19L1Q69YN2 538 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 DYMQ7RTS9 669 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 FBXL5Q9UKA1 691 aa15.24■□□□□ 0.03
PDLIM7-211ENST00000504318 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 CCL16O15467 120 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 PPP6R2O75170 966 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 TBCAO75347 108 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 SEC24AO95486 1093 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 LAMP2P13473 410 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 WNT7BP56706 349 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 NHLH1Q02575 133 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 TDGQ13569 410 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 HTR4Q13639 388 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms