RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SLITRK6Q9H5Y7 841 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 TRPV4Q9HBA0 871 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 BMP2KQ9NSY1 1161 aaPredicted RBP13.95□□□□□ -0.18
LSM6-204ENST00000504181 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 PLXND1Q9Y4D7 1925 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 ADAMTS3O15072 1205 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
LSM6-204ENST00000504181 GAS7O60861 476 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 MOSPD3O75425 235 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 MYL4P12829 197 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 MAPK8P45983 427 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
LSM6-204ENST00000504181 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
LSM6-204ENST00000504181 CYP4A22Q5TCH4 519 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.94□□□□□ -0.18
LSM6-204ENST00000504181 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 CYP2U1Q7Z449 544 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 HACE1Q8IYU2 909 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 RNF149Q8NC42 400 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 TMEM143Q96AN5 459 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 LENG9Q96B70 501 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 JPH2Q9BR39 696 aaPredicted RBP13.94□□□□□ -0.18
LSM6-204ENST00000504181 TEKT3Q9BXF9 490 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 LNPKQ9C0E8 428 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 INVSQ9Y283 1065 aa13.94□□□□□ -0.18
LSM6-204ENST00000504181 SH2B2O14492 632 aaPredicted RBP13.93□□□□□ -0.18
LSM6-204ENST00000504181 MSH4O15457 936 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 PRC1O43663 620 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 NPTXRO95502 500 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 AXLP30530 894 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 ELF1P32519 619 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 FAM193AP78312 1265 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 PTH1RQ03431 593 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 FCHO2Q0JRZ9 810 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 TEAD2Q15562 447 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 ANO5Q75V66 913 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
LSM6-204ENST00000504181 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
LSM6-204ENST00000504181 MICU3Q86XE3 530 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 CAMKK1Q8N5S9 505 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 PSPC1Q8WXF1 523 aaKnown RBP13.93□□□□□ -0.18
LSM6-204ENST00000504181 GLT8D2Q9H1C3 349 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 OBSL1O75147 1896 aa13.93□□□□□ -0.18
LSM6-204ENST00000504181 CCDC194A0A1B0GVG4 234 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 ATG13O75143 517 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 FGFR3P22607 806 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 NPEPPSP55786 919 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 ROR1Q01973 937 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 PMS2CLQ68D20 193 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 SLC7A3Q8WY07 619 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 CYP4F11Q9HBI6 524 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 RAI2Q9Y5P3 530 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 INSL5Q9Y5Q6 135 aa13.92□□□□□ -0.18
LSM6-204ENST00000504181 HELZP42694 1942 aaKnown RBP13.92□□□□□ -0.18
LSM6-204ENST00000504181 CITO14578 2027 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 MUC22E2RYF6 1773 aaPredicted RBP13.91□□□□□ -0.18
LSM6-204ENST00000504181 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 SEC24AO95486 1093 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 PRKCBP05771 671 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
LSM6-204ENST00000504181 ARPP19P56211 112 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 TNK2Q07912 1038 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 NCBP1Q09161 790 aaKnown RBP13.91□□□□□ -0.18
LSM6-204ENST00000504181 IQCEQ6IPM2 695 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 ZNF605Q86T29 641 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 ELMOD1Q8N336 334 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
LSM6-204ENST00000504181 ZNF461Q8TAF7 563 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 SLC39A7Q92504 469 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 PIGKQ92643 395 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
LSM6-204ENST00000504181 UBL7Q96S82 380 aaPredicted RBP13.91□□□□□ -0.18
LSM6-204ENST00000504181 TMEM209Q96SK2 561 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 RIT2Q99578 217 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 DACH1Q9UI36 760 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 SLC12A7Q9Y666 1083 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 ZMYM2Q9UBW7 1377 aa13.91□□□□□ -0.18
LSM6-204ENST00000504181 PIEZO2Q9H5I5 2752 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 INO80B-WBP1J3KQ70 363 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 RNF40O75150 1001 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 ARF4P18085 180 aaPredicted RBP13.9□□□□□ -0.18
LSM6-204ENST00000504181 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.18
LSM6-204ENST00000504181 CIITAP33076 1130 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 DHPSP49366 369 aaPredicted RBP13.9□□□□□ -0.18
LSM6-204ENST00000504181 LMAN2Q12907 356 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 TRIM61Q5EBN2 209 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 FSTL4Q6MZW2 842 aa13.9□□□□□ -0.18
LSM6-204ENST00000504181 HAUS6Q7Z4H7 955 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms