RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LSM14BQ9BX40 385 aaKnown RBP3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 ACE2Q9BYF1 805 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 RHOBTB2Q9BYZ6 727 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 TCF7L1Q9HCS4 588 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 NCDNQ9UBB6 729 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 RNF7Q9UBF6 113 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 NOB1Q9ULX3 412 aaKnown RBP3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 ANKRD6Q9Y2G4 727 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 NRP2O60462 931 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 NDUFS2O75306 463 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 C1QL1O75973 258 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 MATN4O95460 622 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 IL33O95760 270 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 C5AR1P21730 350 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 DDX6P26196 483 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 MGAT1P26572 445 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 CACNA2D1P54289 1103 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 NRG3P56975 720 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 MXRA7P84157 204 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 MGAT5Q09328 741 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF169Q14929 603 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 ANO4Q32M45 955 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 CCDC178Q5BJE1 867 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF425Q6IV72 752 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 LMBR1LQ6UX01 489 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 GRASPQ7Z6J2 395 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 GLB1L2Q8IW92 636 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 TPH2Q8IWU9 490 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 CPEB3Q8NE35 698 aaKnown RBP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 SPATA3Q8NHX4 192 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 FATE1Q969F0 183 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 HSPBAP1Q96EW2 488 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 IL17RAQ96F46 866 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 FDXACB1Q9BRP7 624 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 SOX7Q9BT81 388 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 TUBD1Q9UJT1 453 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZBTB21Q9ULJ3 1066 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 HDAC5Q9UQL6 1122 aa3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 TTBK1Q5TCY1 1321 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P35-201ENST00000503360 CGB1A6NKQ9 187 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 PRPF3O43395 683 aaKnown RBP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 RFPL1O75677 317 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 SEC24DO94855 1032 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZRANB2O95218 330 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 LY86O95711 162 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 GAAP10253 952 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 HNRNPLP14866 589 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 PTH2RP49190 550 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF81P51508 661 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 KIF23Q02241 960 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 CD69Q07108 199 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 MALLQ13021 153 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 ADRM1Q16186 407 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 HSP90AB2PQ58FF8 381 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 MUM1L1Q5H9M0 696 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 FAM102BQ5T8I3 360 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 BTNL9Q6UXG8 535 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 MYO1HQ8N1T3 1032 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 MIER2Q8N344 545 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 UIMC1Q96RL1 719 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 ADAM2Q99965 735 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF70Q9UC06 446 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 PNMA8BQ9ULN7 279 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 DNM3Q9UQ16 869 aa3.18□□□□□ -1.9
HMGB1P35-201ENST00000503360 PRR5-ARHGAP8B1AHC4 643 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 GSPT1P15170 499 aaKnown RBP3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 ATF3P18847 181 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 VCAM1P19320 739 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 CYP2C19P33261 490 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 ABCG1P45844 678 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 GZMKP49863 264 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 SLC16A1P53985 500 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 ADKP55263 362 aaKnown RBP3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 MLC1Q15049 377 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 UAP1L1Q3KQV9 507 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 NXNQ6DKJ4 435 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 NOL8Q76FK4 1167 aaKnown RBP3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 PTF1AQ7RTS3 328 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 C14orf80Q86SX3 495 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 TCEAL8Q8IYN2 117 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 SH2D3CQ8N5H7 860 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 MAGEB6Q8N7X4 407 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 LRGUKQ96M69 825 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 NUP88Q99567 741 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 ADI1Q9BV57 179 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 SLC29A3Q9BZD2 475 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 GREM2Q9H772 168 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 DMRT3Q9NQL9 472 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 SERPINB13Q9UIV8 391 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 INTUQ9ULD6 942 aa3.17□□□□□ -1.9
HMGB1P35-201ENST00000503360 A0A1W2PR48 441 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 LEFTY2O00292 366 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 AKR1B10O60218 316 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 PRAMEF4O60810 478 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 TMEM127O75204 238 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 ALDH1A2O94788 518 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 SPDEFO95238 335 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms