RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 GRM3Q14832 879 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 MINDY4Q4G0A6 757 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 PABPC1LQ4VXU2 614 aaKnown RBP5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 USP39Q53GS9 565 aaKnown RBP5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 CYB5RLQ6IPT4 315 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 SLC4A10Q6U841 1118 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 MED25Q71SY5 747 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 FAM90A1Q86YD7 464 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 DENND1CQ8IV53 801 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 C1orf43Q9BWL3 253 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 GSTO2Q9H4Y5 243 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 VSX1Q9NZR4 365 aaPredicted RBP5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 POGKQ9P215 609 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 CHST2Q9Y4C5 530 aa5.52□□□□□ -1.53
CDC42SE2-204ENST00000502639 GOLGA6L6A8MZA4 724 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 B3GALT2O43825 422 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 CTNND1O60716 968 aaKnown RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 SLC43A1O75387 559 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 TUSC2O75896 110 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 AMHP03971 560 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 RPLP2P05387 115 aaKnown RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 C1SP09871 688 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 TYRP14679 529 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 NR4A1P22736 598 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 HTR1BP28222 390 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 PRDX5P30044 214 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 RNASE9P60153 205 aaKnown RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 DGCR2P98153 550 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 CRHR2Q13324 411 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 CNGB1Q14028 1251 aaPredicted RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 PLS1Q14651 629 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 SPRED1Q7Z699 444 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 PPP1R3BQ86XI6 285 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 C1orf210Q8IVY1 113 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 CELF5Q8N6W0 485 aaKnown RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 KLHDC4Q8TBB5 520 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 PHACTR3Q96KR7 559 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 NT5C1BQ96P26 610 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 ZNF768Q9H5H4 540 aaKnown RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 ZNF703Q9H7S9 590 aaPredicted RBP5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 OBP2AQ9NY56 170 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 ABCF2Q9UG63 623 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 POLHQ9Y253 713 aa5.51□□□□□ -1.53
CDC42SE2-204ENST00000502639 CDHR4A6H8M9 788 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 FAM20BO75063 409 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 ITGB1P05556 798 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 ATF3P18847 181 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 NOMO3P69849 1222 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 CREMQ03060 361 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 SLFN5Q08AF3 891 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 PDCD4Q53EL6 469 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 NOMO2Q5JPE7 1267 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 THEMIS2Q5TEJ8 643 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 AGAP9Q5VTM2 703 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 SWSAP1Q6NVH7 229 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 RNF207Q6ZRF8 634 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 SH2D3CQ8N5H7 860 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 CAMKK1Q8N5S9 505 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 CDK5RAP1Q96SZ6 601 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 MRPL46Q9H2W6 279 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 ARMT1Q9H993 441 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 KMT5AQ9NQR1 393 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 LMBRD1Q9NUN5 540 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 SORCS3Q9UPU3 1222 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 CLCA2Q9UQC9 943 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 STXBP5LQ9Y2K9 1186 aa5.5□□□□□ -1.53
CDC42SE2-204ENST00000502639 A0A088AWK7 358 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 U2AF1L5P0DN76 240 aaPredicted RBP5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 AGFG1P52594 562 aaKnown RBP5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 USP14P54578 494 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 U2AF1Q01081 240 aaKnown RBP eCLIP5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 GBX1Q14549 363 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 LLGL1Q15334 1064 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 GFOD2Q3B7J2 385 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 NRN1LQ496H8 165 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 ARHGAP29Q52LW3 1261 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 NPNTQ6UXI9 565 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 LRRC55Q6ZSA7 311 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 SH3RF3Q8TEJ3 882 aaPredicted RBP5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 CACTINQ8WUQ7 758 aaKnown RBP5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 TIFAQ96CG3 184 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 C8orf48Q96LL4 319 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 FAM193BQ96PV7 902 aaPredicted RBP5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 JKAMPQ9P055 326 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 PCDHA1Q9Y5I3 950 aa5.49□□□□□ -1.53
CDC42SE2-204ENST00000502639 H3BUI4 141 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 ERC2O15083 957 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 MATN4O95460 622 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 AHSGP02765 367 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 ELANEP08246 267 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 MTHFD1P11586 935 aaKnown RBP5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 GCSHP23434 173 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 MGAT1P26572 445 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 SMARCA1P28370 1054 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 PHKA1P46020 1223 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 CCDC93Q567U6 631 aa5.48□□□□□ -1.53
CDC42SE2-204ENST00000502639 UTP14CQ5TAP6 766 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms