RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CYP1B1Q16678 543 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 RNF207Q6ZRF8 634 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 SLC47A2Q86VL8 602 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 KIF2BQ8N4N8 673 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 EPS8L1Q8TE68 723 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 TMEM174Q8WUU8 243 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 PRCCQ92733 491 aaPredicted RBP17.49■□□□□ 0.39
COL6A1-206ENST00000498614 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 RPS6KC1Q96S38 1066 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 CDC42EP4Q9H3Q1 356 aaKnown RBP17.49■□□□□ 0.39
COL6A1-206ENST00000498614 ST6GALNAC4Q9H4F1 302 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 HOMER3Q9NSC5 361 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 C15orf41Q9Y2V0 281 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 RTN2O75298 545 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ALADP13716 330 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ZNF568Q3ZCX4 644 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 VSTM1Q6UX27 236 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ARHGEF2Q92974 986 aaKnown RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 CD101Q93033 1021 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 RSRC1Q96IZ7 334 aaKnown RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 RRAGCQ9HB90 399 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 AAASQ9NRG9 546 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 TOPORSQ9NS56 1045 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 TBX20Q9UMR3 447 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 A8MUI8 341 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 NPTX2P47972 431 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 JAK3P52333 1124 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 TCEAL1Q15170 157 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ANO5Q75V66 913 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ANKRD42Q8N9B4 389 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 TMEM161BQ8NDZ6 487 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 FAXDC2Q96IV6 333 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 RUNDC3BQ96NL0 473 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ROPN1BQ9BZX4 212 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 ROPN1Q9HAT0 212 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 CTNNAL1Q9UBT7 734 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 NOCTQ9UK39 431 aaKnown RBP17.48■□□□□ 0.39
COL6A1-206ENST00000498614 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
COL6A1-206ENST00000498614 DENND3A2RUS2 1198 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 TP73O15350 636 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 KRT16P08779 473 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 BNIP1Q12981 228 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 NUGGCQ68CJ6 796 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 CYFIP1Q7L576 1253 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 SULF1Q8IWU6 871 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 FAM71AQ8IYT1 594 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 CCHCR1Q8TD31 782 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 BSNDQ8WZ55 320 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 IWS1Q96ST2 819 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 WNT8AQ9H1J5 351 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 RIPK3Q9Y572 518 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 MAPK13O15264 365 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 SUN1O94901 812 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 CNGA1P29973 690 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 COPS2P61201 443 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 TRMT10CQ7L0Y3 403 aaKnown RBP17.47■□□□□ 0.39
COL6A1-206ENST00000498614 ATG4CQ96DT6 458 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 TIPINQ9BVW5 301 aa17.47■□□□□ 0.39
COL6A1-206ENST00000498614 PCNTO95613 3336 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 ZBED4O75132 1171 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 CHKAP35790 457 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 SLC8A3P57103 927 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 KRT76Q01546 638 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 DMP1Q13316 513 aaPredicted RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 MPP2Q14168 576 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 EP400NLQ6ZTU2 488 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 MAB21L3Q8N8X9 362 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 GDAP1Q8TB36 358 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 PARD3BQ8TEW8 1205 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 KLHL29Q96CT2 875 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 KCNK9Q9NPC2 374 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 TRIM33Q9UPN9 1127 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 EXOC7Q9UPT5 735 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 SPOPO43791 374 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 ECEL1O95672 775 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 GH1P01241 217 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 DLATP10515 647 aaKnown RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 SFNP31947 248 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 MFAP3P55082 362 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 FMO1Q01740 532 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 CALCOCO2Q13137 446 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 ZKSCAN8Q15776 578 aaPredicted RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 KRT39Q6A163 491 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 USP50Q70EL3 339 aaPredicted RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 MAP4K3Q8IVH8 894 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 FAM84AQ96KN4 292 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 ANKEF1Q9NU02 776 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 DNAJC17Q9NVM6 304 aaKnown RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 MAP3K20Q9NYL2 800 aaKnown RBP17.46■□□□□ 0.39
COL6A1-206ENST00000498614 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
COL6A1-206ENST00000498614 SORBS3O60504 671 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 GJB6O95452 261 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms