RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 EBF1Q9UH73 591 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 GIT1Q9Y2X7 761 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 LRRK2Q5S007 2527 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 PCDH15Q96QU1 1955 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 ARID2Q68CP9 1835 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 NTRK1P04629 796 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 MYL4P12829 197 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 DGKEP52429 567 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 ATXN3P54252 364 aaPredicted RBP16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 TNK2Q07912 1038 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 HNRNPDQ14103 355 aaKnown RBP16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 TEAD2Q15562 447 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 TRIP6Q15654 476 aaKnown RBP16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 GPIHBP1Q8IV16 184 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 CAMK1GQ96NX5 476 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 CEP89Q96ST8 783 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 TPSD1Q9BZJ3 242 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 NXF3Q9H4D5 531 aaKnown RBP16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 PRORYQ9H606 182 aa16.22■□□□□ 0.19
CHMP2B-205ENST00000494980 OPHN1O60890 802 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 FOSP01100 380 aaPredicted RBP16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 AKAP5P24588 427 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 GRSF1Q12849 480 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 TMEM196Q5HYL7 178 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 TICAM2Q86XR7 235 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 TMEFF1Q8IYR6 380 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 LZTS2Q9BRK4 669 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 DISC1Q9NRI5 854 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 KLK14Q9P0G3 267 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
CHMP2B-205ENST00000494980 CEP192Q8TEP8 1941 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 CAPN8A6NHC0 703 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 CD59P13987 128 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 ITPKBP27987 946 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 ELF1P32519 619 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 ELAVL2Q12926 359 aaKnown RBP16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 MAPK6Q16659 721 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 USP39Q53GS9 565 aaKnown RBP16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 ARMCX6Q7L4S7 300 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 HAUS6Q7Z4H7 955 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 LRRC3BQ96PB8 259 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 RIC8AQ9NPQ8 531 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 TMEM74BQ9NUR3 256 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 RELNP78509 3460 aa16.2■□□□□ 0.18
CHMP2B-205ENST00000494980 ATXN2Q99700 1313 aaKnown RBP16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 ZMYM2Q9UBW7 1377 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 ERLIN2O94905 339 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 EGFP01133 1207 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 CFIP05156 583 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 SRGAP2CP0DJJ0 459 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 ROR1Q01973 937 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 TRDNQ13061 729 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 TUSC3Q13454 348 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 DMC1Q14565 340 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 ZNF654Q8IZM8 581 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 SHKBP1Q8TBC3 707 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 FCRL3Q96P31 734 aaPredicted RBP16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 MAP3K14Q99558 947 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 DSCC1Q9BVC3 393 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 NIFKQ9BYG3 293 aaKnown RBP16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 TRIM6Q9C030 488 aaPredicted RBP16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 ASAH2Q9NR71 780 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 PCDHB9Q9Y5E1 797 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 INSL5Q9Y5Q6 135 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 CREBBPQ92793 2442 aa16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 COL5A1P20908 1838 aaPredicted RBP16.19■□□□□ 0.18
CHMP2B-205ENST00000494980 CHMP2AO43633 222 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 SH3BP5O60239 455 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 TSPAN1O60635 241 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 MAFO75444 373 aaPredicted RBP16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 FGFR3P22607 806 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 SART3Q15020 963 aaKnown RBP16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 ITPRIPL2Q3MIP1 535 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 IQCEQ6IPM2 695 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 NOTUMQ6P988 496 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 SLC23A3Q6PIS1 610 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 SYT13Q7L8C5 426 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 MARCH9Q86YJ5 346 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 SYT12Q8IV01 421 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 HACE1Q8IYU2 909 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 ELMOD1Q8N336 334 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 FAM181AQ8N9Y4 354 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 OR2I1PQ8NGU4 316 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 RPLP0P6Q8NHW5 317 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 CCDC51Q96ER9 411 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 CYP4F11Q9HBI6 524 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 KNTC1P50748 2209 aa16.18■□□□□ 0.18
CHMP2B-205ENST00000494980 DDAH1O94760 285 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 WISP1O95388 367 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 SEC24AO95486 1093 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 PRKCBP05771 671 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 ADCY7P51828 1080 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 NAPAP54920 295 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms