RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MLF2Q15773 248 aaPredicted RBP13.86□□□□□ -0.19
SKA1-205ENST00000494518 IL17AQ16552 155 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 SEZ6Q53EL9 994 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 VARS2Q5ST30 1063 aaKnown RBP13.86□□□□□ -0.19
SKA1-205ENST00000494518 ANKS3Q6ZW76 656 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
SKA1-205ENST00000494518 C1orf210Q8IVY1 113 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 ZBTB45Q96K62 511 aaPredicted RBP13.86□□□□□ -0.19
SKA1-205ENST00000494518 UROC1Q96N76 676 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
SKA1-205ENST00000494518 TCHPQ9BT92 498 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 MRPL4Q9BYD3 311 aaKnown RBP13.86□□□□□ -0.19
SKA1-205ENST00000494518 PLA2G2FQ9BZM2 168 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 KMT5AQ9NQR1 393 aa13.86□□□□□ -0.19
SKA1-205ENST00000494518 KANSL1LA0AUZ9 987 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 WDR27A2RRH5 827 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 PRRG1O14668 218 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 MEFVO15553 781 aaPredicted RBP13.85□□□□□ -0.19
SKA1-205ENST00000494518 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 LRG1P02750 347 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 RHOP08100 348 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 HMGN5P82970 282 aaKnown RBP13.85□□□□□ -0.19
SKA1-205ENST00000494518 MAPK7Q13164 816 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 KIAA2013Q8IYS2 634 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 IGSF22Q8N9C0 903 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 TCEAL4Q96EI5 215 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 SHDQ96IW2 340 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 PLIN2Q99541 437 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 CORO1BQ9BR76 489 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 PTPRHQ9HD43 1115 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 TOPORSQ9NS56 1045 aaPredicted RBP13.85□□□□□ -0.19
SKA1-205ENST00000494518 SPATA6Q9NWH7 488 aaPredicted RBP13.85□□□□□ -0.19
SKA1-205ENST00000494518 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 DNM3Q9UQ16 869 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 BACE2Q9Y5Z0 518 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 NCOR2Q9Y618 2525 aa13.85□□□□□ -0.19
SKA1-205ENST00000494518 FAM170BA6NMN3 283 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 NRG2O14511 850 aaPredicted RBP13.84□□□□□ -0.19
SKA1-205ENST00000494518 SEC24AO95486 1093 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 ELF1P32519 619 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 KRT79Q5XKE5 535 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 RINT1Q6NUQ1 792 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 ALKAL1Q6UXT8 129 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 TPRG1Q6ZUI0 275 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 MAML2Q8IZL2 1156 aaPredicted RBP13.84□□□□□ -0.19
SKA1-205ENST00000494518 DCLK2Q8N568 766 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 ACAP3Q96P50 834 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 MMTAG2Q9BU76 263 aaKnown RBP13.84□□□□□ -0.19
SKA1-205ENST00000494518 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 CYP4F11Q9HBI6 524 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 ARHGAP28Q9P2N2 729 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 TUBGCP4Q9UGJ1 667 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
SKA1-205ENST00000494518 ABLIM1O14639 778 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 POU2F2P09086 479 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 MCF2P10911 925 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 MCM4P33991 863 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 SPAG1Q07617 926 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 GRM2Q14416 872 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 PDIA5Q14554 519 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 CTXN3Q4LDR2 81 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 XKR4Q5GH76 650 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 TANGO2Q6ICL3 276 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 C1orf186Q6ZWK4 172 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 ZSCAN31Q96LW9 406 aaPredicted RBP13.83□□□□□ -0.2
SKA1-205ENST00000494518 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 DDX23Q9BUQ8 820 aaKnown RBP13.83□□□□□ -0.2
SKA1-205ENST00000494518 BCO2Q9BYV7 579 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 TMEM134Q9H6X4 195 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 LTB4R2Q9NPC1 389 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 HEBP1Q9NRV9 189 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 SLC38A7Q9NVC3 462 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 FBXL5Q9UKA1 691 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 KCNH3Q9ULD8 1083 aa13.83□□□□□ -0.2
SKA1-205ENST00000494518 TCHHQ07283 1943 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 COL4A2P08572 1712 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 LAMTOR5O43504 91 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 PTPN2P17706 415 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 PROZP22891 400 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 U2AF2P26368 475 aaKnown RBP eCLIP13.82□□□□□ -0.2
SKA1-205ENST00000494518 TARSP26639 723 aaKnown RBP13.82□□□□□ -0.2
SKA1-205ENST00000494518 CCR2P41597 374 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 MATR3P43243 847 aaKnown RBP eCLIP13.82□□□□□ -0.25e-6■■□□□ 12.5
SKA1-205ENST00000494518 PFKPQ01813 784 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 PRKCQQ04759 706 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 CSTF1Q05048 431 aaKnown RBP13.82□□□□□ -0.2
SKA1-205ENST00000494518 SLC8B1Q6J4K2 584 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 ZC3H14Q6PJT7 736 aaKnown RBP13.82□□□□□ -0.2
SKA1-205ENST00000494518 TSSK4Q6SA08 328 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 DTHD1Q6ZMT9 781 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 ZNF461Q8TAF7 563 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 RMDN1Q96DB5 314 aa13.82□□□□□ -0.2
SKA1-205ENST00000494518 PNMA5Q96PV4 448 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms