RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PRSS36Q5K4E3 855 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 TRMT1LQ7Z2T5 733 aaKnown RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 SPRED2Q7Z698 418 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 TRAPPC12Q8WVT3 735 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 EAF1Q96JC9 268 aaPredicted RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 MFSD14AQ96MC6 490 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 IFIH1Q9BYX4 1025 aaKnown RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 FAM49AQ9H0Q0 323 aaPredicted RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 SLKQ9H2G2 1235 aaPredicted RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 ZNF302Q9NR11 478 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 C1GALT1Q9NS00 363 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 UBP1Q9NZI7 540 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 TRIP12Q14669 1992 aaPredicted RBP9.12□□□□□ -0.95
RIF1-211ENST00000494333 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 EDIL3O43854 480 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 HBP1O60381 514 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 DTNBO60941 627 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 KLRC1P26715 233 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 ANAPC15P60006 121 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
RIF1-211ENST00000494333 MGAT3Q09327 533 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 SCRN1Q12765 414 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 FAM160B1Q5W0V3 765 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 CCDC60Q8IWA6 550 aaPredicted RBP9.12□□□□□ -0.95
RIF1-211ENST00000494333 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 BLIDQ8IZY5 108 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 TET1Q8NFU7 2136 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 ZNF507Q8TCN5 953 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 TBCKQ8TEA7 893 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 APBB2Q92870 758 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 TOP1MTQ969P6 601 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 AIFM3Q96NN9 605 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 LRRC3Q9BY71 257 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 C22orf23Q9BZE7 217 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 IGSF5Q9NSI5 407 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 TCEAL9Q9UHQ7 104 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 MTUS1Q9ULD2 1270 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 INSL6Q9Y581 213 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 PCDHA2Q9Y5H9 948 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 CDY2AQ9Y6F7 541 aa9.12□□□□□ -0.95
RIF1-211ENST00000494333 SMIM35A0A1B0GVV1 85 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 LINC01553A4QN01 128 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 M0QZ92 97 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 MSH4O15457 936 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 PFKFB2O60825 505 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 CDKL5O76039 1030 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 RPLP2P05387 115 aaKnown RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 POU3F3P20264 500 aaPredicted RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 ADMP35318 185 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 AK2P54819 239 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 MRPS6P82932 125 aaKnown RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 LPIN1Q14693 890 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 ANKRD1Q15327 319 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 FBXO47Q5MNV8 452 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 KRT40Q6A162 431 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 ZNF746Q6NUN9 644 aaPredicted RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 MTHFD1LQ6UB35 978 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 REC114Q7Z4M0 266 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 SHISA5Q8N114 240 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 NME8Q8N427 588 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 ATP8B4Q8TF62 1192 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 GATA6Q92908 595 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 LENG9Q96B70 501 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 TBC1D32Q96NH3 1257 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 TGS1Q96RS0 853 aaKnown RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 NT5C1AQ9BXI3 368 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 GABBR1Q9UBS5 961 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 KCNJ14Q9UNX9 436 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 POLR3KQ9Y2Y1 108 aaPredicted RBP9.11□□□□□ -0.95
RIF1-211ENST00000494333 PCDHA10Q9Y5I2 948 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 CORINQ9Y5Q5 1042 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 MTCH2Q9Y6C9 303 aa9.11□□□□□ -0.95
RIF1-211ENST00000494333 ENPP3O14638 875 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 GSC2O15499 205 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 EIF5BO60841 1220 aaKnown RBP9.1□□□□□ -0.95
RIF1-211ENST00000494333 ADAM23O75077 832 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 XBP1P17861 261 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 CD52P31358 61 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 NEK4P51957 841 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 ERVK-21P61565 698 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 HTRA4P83105 476 aaPredicted RBP9.1□□□□□ -0.95
RIF1-211ENST00000494333 GRB10Q13322 594 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 ZNF484Q5JVG2 852 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 GALNT17Q6IS24 598 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 TSHZ1Q6ZSZ6 1077 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 FBXL6Q8N531 539 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 KCT2Q8NC54 265 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 GJA10Q969M2 543 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 YME1L1Q96TA2 773 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 RIT2Q99578 217 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 C17orf80Q9BSJ5 609 aa9.1□□□□□ -0.95
RIF1-211ENST00000494333 CELF4Q9BZC1 486 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms