RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 MAN1B1Q9UKM7 699 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 MAPK8IP1Q9UQF2 711 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 PRG3Q9Y2Y8 225 aaPredicted RBP12.6□□□□□ -0.39
CTSA-209ENST00000493522 ZDBF2Q9HCK1 2354 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 SCN1AP35498 2009 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 DMDP11532 3685 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 CASTOR2A6NHX0 329 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 NT5C1B-RDH14C9J2C7 533 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 BIN1O00499 593 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 PER2O15055 1255 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 KIAA0391O15091 583 aaKnown RBP12.59□□□□□ -0.39
CTSA-209ENST00000493522 CLIC2O15247 247 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 TGFB1I1O43294 461 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 FGF18O76093 207 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 OR1G1P47890 313 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 SLC11A1P49279 550 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 ALDH7A1P49419 539 aaKnown RBP12.59□□□□□ -0.39
CTSA-209ENST00000493522 CYP2J2P51589 502 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 SPAG1Q07617 926 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 DSC1Q08554 894 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 TUSC3Q13454 348 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 SLC10A6Q3KNW5 377 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 ZNF658Q5TYW1 1059 aaPredicted RBP12.59□□□□□ -0.39
CTSA-209ENST00000493522 ISM2Q6H9L7 571 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 GPD1LQ8N335 351 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 PRSS33Q8NF86 280 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 RPGRIP1Q96KN7 1286 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 FAM213AQ9BRX8 229 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 TMEM175Q9BSA9 504 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 HSPBP1Q9NZL4 362 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 CNTN3Q9P232 1028 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 CACNG4Q9UBN1 327 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 CPSF3Q9UKF6 684 aaKnown RBP12.59□□□□□ -0.39
CTSA-209ENST00000493522 PCDHGC5Q9Y5F6 944 aa12.59□□□□□ -0.39
CTSA-209ENST00000493522 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 CARNS1A5YM72 827 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 MEFVO15553 781 aaPredicted RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 EXTL3O43909 919 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 MBD3O95983 291 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 LDHAP00338 332 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 SNRPFP62306 86 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 DUSP6Q16828 381 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 IER5LQ5T953 404 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 BRSK2Q8IWQ3 736 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 COLGALT2Q8IYK4 626 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 SLC39A11Q8N1S5 342 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 FBXL6Q8N531 539 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 ZSWIM2Q8NEG5 633 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 SPATA20Q8TB22 786 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 GPT2Q8TD30 523 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 SUSD6Q92537 303 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 PPP1R10Q96QC0 940 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 SLC38A7Q9NVC3 462 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 RBAKQ9NYW8 714 aaPredicted RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 CGNQ9P2M7 1197 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 PUF60Q9UHX1 559 aaKnown RBP12.58□□□□□ -0.4
CTSA-209ENST00000493522 LZTS1Q9Y250 596 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 FAN1Q9Y2M0 1017 aa12.58□□□□□ -0.4
CTSA-209ENST00000493522 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 LACTBL1A8MY62 500 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
CTSA-209ENST00000493522 IL18RAPO95256 599 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 GALTP07902 379 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 NFICP08651 508 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 KCNE1P15382 129 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 MCM4P33991 863 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 STIM1Q13586 685 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 XKR4Q5GH76 650 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 CRELD2Q6UXH1 353 aaPredicted RBP12.57□□□□□ -0.4
CTSA-209ENST00000493522 ALKAL1Q6UXT8 129 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 TMEM173Q86WV6 379 aaPredicted RBP12.57□□□□□ -0.4
CTSA-209ENST00000493522 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 VN1R2Q8NFZ6 395 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
CTSA-209ENST00000493522 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 ZMAT2Q96NC0 199 aaKnown RBP12.57□□□□□ -0.4
CTSA-209ENST00000493522 KCTD10Q9H3F6 313 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 ENTPD7Q9NQZ7 604 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 MARCH5Q9NX47 278 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 TUBGCP4Q9UGJ1 667 aa12.57□□□□□ -0.4
CTSA-209ENST00000493522 PDXKO00764 312 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 NRP1O14786 923 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 FSCN2O14926 492 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 XPOTO43592 962 aaKnown RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 EXOC3O60645 756 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 NR3C1P04150 777 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 ALDH2P05091 517 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 ADRB2P07550 413 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 PRCPP42785 496 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 ERVFC1P60507 584 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms